Polyodon spathula (Mississippi paddlefish): 121303619
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Entry
121303619 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121303619
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121303619
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121303619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-Nse
TRAF3_RING
zf-WRNIP1_ubi
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121303619
NCBI-ProteinID:
XP_041090348
LinkDB
All DBs
Position
2:complement(91322836..91336071)
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AA seq
261 aa
AA seq
DB search
MDENQWDILESEQGGISLIEGISNLVLATVVLCAAFLGGLTILLCRNEQQNIHPENQARV
TAVRQHLQSEQDAPAQDRQQFYADMSCPVCLQQASLPVETNCGHLFCGSCIIAYWRHGSW
LGAVNCPVCRQMVTLLFPLFQEQDQPQQQQEAGQILQDVNDYNRRYSGQARPLMDHLRDV
PTLLRHAFREMLSRRALFCMFQIRILLCLVGALMYLVSPLDLLPEALFGILGFMDDLFVI
VLFFIYISIMYREVVTERLVM
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaaccaatgggatattctggaatctgaacagggtggtatttcactgatagaa
gggataagtaacctggttcttgctacagtggttctctgtgctgcatttctgggtggactt
acaattcttctgtgcaggaatgaacagcagaacatccaccctgaaaaccaagcacgagtg
actgctgtaagacagcatctgcagtccgaacaggatgcacctgcacaagaccgacagcag
ttctacgcagacatgtcctgtccagtctgtttacaacaagcttcgctgcctgttgaaacc
aactgtggtcacctattctgtggatcctgcattattgcatactggagacatgggtcatgg
cttggagctgttaattgccccgtctgtagacagatggtgactttgctgttcccgttgttt
caagagcaagaccagccccagcagcagcaagaggcaggccagatacttcaggatgtcaat
gattacaaccggagatattccggccaggccagacctctgatggatcacctccgagatgtc
ccgacattgctgcgccatgccttcagggagatgctttcaaggcgggcattgttttgtatg
tttcaaattcgaatcctcctctgcctggtcggtgctttaatgtaccttgtgtcgcccttg
gatttacttcctgaagctctatttggaatcctgggtttcatggatgacctttttgtgatc
gtcttgtttttcatctacatctccatcatgtacagggaagtggtgaccgaaaggctagtc
atgtga
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integrated database retrieval system
