Polyodon spathula (Mississippi paddlefish): 121303624
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Entry
121303624 CDS
T07273
Name
(RefSeq) astrotactin-2-like isoform X1
KO
K24479
astrotactin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121303624
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121303624
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
FXa_inhibition
MACPF
cEGF
Dsh_C
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121303624
NCBI-ProteinID:
XP_041090353
LinkDB
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Position
34:complement(2001481..2730247)
Genome browser
AA seq
1327 aa
AA seq
DB search
MSPMQTAIEARSLFVHLLTKSWRGPERRESGMAGRVLLSPNTLILLGVLLTGTCAAGGGG
GPGLLGEESYRENDMDSPCEVKTVTVSTLPVLRENEFSFTGGGAGSLAGGGGESRLLLFV
RTDLPGRISVLDDLDNTALPYFTLEMSGTGVDISLVHWKQQWLENGTLYFHVSMSNAEHL
SQVTAPPLQEPSEIVNEQMHVLHISVMGGLIALLLLILVFTMVLYARRRWCKRRRVPQKS
ASTEATHEIHYIPSVLLGPQARDSFRSSRVQAHNSVIGVPIRETPILDDYDYEEEEPHRR
EDDFGSQVTRTLDSLGKGEDEKPCFQTRAIDPKQDAVESLVQKFKESFRTNTPIKIAHVQ
QESHSSSTSRTKRRSRSRGRAVFSKMGGSGSEADDETPLKFYTEQHRGRRRSKGSPRSHV
NKNTLTLLVVSSCVLAVVYGSQLPCPLTVKVTLHVPEHFIADGSSFLVSMGSYLDVSDWL
NPAKLSLYYQTNSTSPWVRDYCGQRTTAPCEQLCDQETGECSCHEGYSPDPVHKHLCVRS
DWGENEGPWPYTTLERGYDLVTGEQAPEKIFRSTYSLGQGLWLPVSKSFVVPPVELSINP
LASCKTDVLVTEDPGDIREEALMSTYFETIDDLLSSFGPVRDCAKENGGCRKNYKCVSDR
KVDSSGCMCPAGLRPMKDGTGCYDYAKGTDCSDGFNGGCEQLCLQQLVPLPEDLTSSNVL
MFCGCVEEYRLAADGRSCVLLSDACEGPRCQRQDARLNDTLFGEMLHGYNNKTQQVNQGQ
IFQMTFRDNNFIKDFPQLADGLMVIPLPVEEQCRGVLSEPLPNLPLLTGEAKHSEAMGYP
MVQQWRVRSNLYKVKLSAITLSTGFSTVLKVLNVDSSREELLALIQQHGTHYIAEALYGS
ELTCTIYFPSKKVQQQLWLQYQKEITELGSRKEMRSMPFITYLSGLLSAQVLSDEELISG
VEIRCEEKGHCPATCHLCRRQGKEQVSPSPVLLEITRVVPLYTLIQDNATKEAFRNAVMS
TYWCTGKGDVIEDWCRCDLSAFDENGLPNCSPLLQPELRLAPNLEPSSTMVAMEWVDIEP
VIGYKISDFIIQHKKVEDPLEAEIYTGEVLSFADDLLSGLGSSCVVAGKRHADFSHSIIY
SVVFKCLEPDSLYKFTLTAVDSRGRRSDSSFVSVRTSCPMVDDSKAEEIADKVYNLYNGY
TSGKEQQIAYNTLMETSPSMLYRIQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLDR
VSSYCATLLHSAFIQSRTDTVPYLFCHSEETRPANMVWHSSLQDTKVTCVEKLMSIPRNT
YGDSKLR
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaatgcaaactgcaatagaagctcgcagtctgttcgtgcatcttctcactaaa
agctggagaggaccggagcgcagagaaagcggcatggctgggagagtacttctgagccca
aacaccttaatcctcctcggggtccttttgactgggacctgtgcggcagggggaggcggg
ggaccagggctgctcggggaggagagctacagagagaacgacatggatagcccgtgcgaa
gtgaagacagtaacggtgtccaccctgcctgttcttcgggagaatgagttcagttttacc
gggggaggtgcagggagcttagctggaggaggaggggagtcccggcttctgcttttcgtc
aggaccgaccttcccgggcggatctcggtattggatgacctggacaacaccgctctacct
tacttcacactggaaatgtcggggacgggtgtggatatttccctggtgcattggaagcag
cagtggctggagaatggtaccctctacttccatgtgtccatgagcaatgcagagcacctg
tcccaggtgacggccccccctctccaggagccctcggagattgtgaacgagcagatgcac
gttctccatatttctgtcatgggcggtctgattgcgctgctgctcctcatcctggtcttc
accatggtcctgtatgcccggcggcgatggtgcaagaggaggcgcgtccctcagaagagt
gccagcacagaggccacccacgagatccactacatcccctcggtgctgctgggaccccag
gcccgggacagcttccgcagctcccgcgtccaggcacacaactccgtcattggggtgcca
atccgcgagacccccatcctcgacgactatgactacgaggaagaggagccccaccggcga
gaggacgacttcggcagccaagtgactcgcaccctggacagcctgggcaaaggagaggac
gagaaaccctgctttcagacaagagccattgaccccaaacaagacgcggtggagtccttg
gtgcagaagttcaaggagagttttcgaacgaacacgcccatcaagattgctcatgtgcag
caggagtcccacagctcctccacaagcagaacgaagaggaggagccgttccagaggcagg
gctgtgttcagcaagatgggaggctcggggtcggaggcagacgacgagaccccactcaag
ttctacacagagcagcacaggggccggaggaggagcaaaggttctcccagaagccatgtg
aataagaacaccctgacattactggtagtgagtagctgtgtcctggcggtggtgtacggg
agtcagctgccctgcccccttactgtgaaggttactctgcacgtccctgagcacttcatt
gctgatggaagcagttttctggtgagcatgggaagctatctggatgtgtcggattggtta
aaccctgccaagctctctttgtattaccaaaccaactccacctccccttgggttagagac
tactgtgggcagagaacgacagccccctgtgagcagctctgtgaccaggaaactggtgaa
tgcagctgtcatgaaggctactcccctgatcctgtgcataaacatctttgtgtgaggagc
gactggggagagaatgaaggcccctggccgtacacaacgctggaacgaggttatgacctg
gtcacgggggaacaggctccagagaagatattcagatccacgtacagcctcgggcagggc
ctgtggctgccggtcagtaagagtttcgtggtccctccagtggagctctccattaatccc
ctggcaagctgcaagactgacgtgctggtcacagaagacccgggggatatcagggaagaa
gctctgatgtctacatatttcgaaaccattgatgatctcctttcttccttcgggccagtg
agggactgtgccaaggaaaatgggggatgtagaaaaaactacaagtgtgtttcagaccgg
aaggtggactcttcaggatgcatgtgtccggcaggtctgaggccaatgaaggatgggact
ggttgctatgactacgccaaaggcacagattgctcggatggttttaatggggggtgtgaa
cagctatgccttcagcaactggtgcccttgcccgaggacctcacctccagcaatgttctc
atgttctgtgggtgtgtggaggagtacagactggcagcagacggcaggtcgtgtgtcttg
ctctcagatgcctgcgagggccccaggtgtcagaggcaggacgccaggctcaatgacacc
ctcttcggagagatgctgcacggctacaacaacaagacccagcaagtgaaccagggccag
atcttccagatgacatttagggataacaactttataaaagatttcccccagcttgccgat
gggttaatggtgattcccctccctgtcgaggagcagtgtcgaggggttctgtcggagccg
ttacccaacctgcctctcctgactggagaagccaagcacagtgaagctatgggatacccc
atggtgcaacagtggagagtccgcagtaacctgtacaaggtgaagctcagcgccatcaca
ctgtcaacagggttctctacagtgctgaaggtgctaaacgtggacagcagtcgagaggag
ctgcttgcgctcatccagcagcatggcacacactacattgctgaggccctgtatggctcc
gagctcacctgcaccatatactttcccagcaaaaaggttcagcagcagctctggctccag
taccagaaagaaatcaccgaactggggagcaggaaggagatgagatccatgcccttcatc
acgtacctgtccgggctgctgtctgcacaggtgctgtctgacgaggagctcatctcaggt
gtggagatccgctgcgaggagaagggccactgcccggcaacgtgccacctgtgccgtcgg
cagggcaaggagcaggtcagcccgtccccggtgctgctggagatcacccgcgtggtgccc
ctctacaccctcatccaggacaacgccaccaaggaggctttcaggaacgctgtaatgagc
acctactggtgcacaggaaaaggtgatgtcattgaggactggtgcagatgtgacctgagt
gcctttgatgagaacggactcccaaactgcagccctctgctccagcctgaactacggctg
gctccgaacctggagccatcaagcaccatggtagcgatggaatgggtggacatcgagcct
gttataggatacaagatctcagacttcatcatacagcacaagaaggtggaggacccactg
gaggctgaaatctacaccggggaggtgctgagctttgcagatgatttactgtctggtcta
gggtcctcctgtgtggtggcggggaagcgacacgcagacttctcccattcgatcatctac
tctgtagtctttaagtgtttggaaccagacagcctctacaagtttacgctcacggcagtg
gacagcagaggaaggcggtcagactcgagcttcgtctctgtgagaacatcctgccccatg
gtggatgacagcaaggctgaagaaattgcagacaaggtctataatttatacaacggctac
accagtggcaaggagcagcagattgcctacaacaccctcatggagacctccccctccatg
ctgtaccgcatccagcaccactacaactcccactacgagaaattcggggatttcgtctgg
cgcagtgaagacgagcttggaccaaggaaagcccacctgatcctgaggagactggacaga
gtaagcagctactgtgccacattgctccacagtgccttcatccaaagcaggactgataca
gtaccctatctcttctgccacagcgaggagacaagaccagccaacatggtctggcacagt
tctttacaggacaccaaagtgacttgtgttgaaaagctgatgtcaattccacgaaacaca
tacggagactccaaactacgatga
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