KEGG   Polyodon spathula (Mississippi paddlefish): 121303630
Entry
121303630         CDS       T07273                                 
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121303630
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pspa01001]
    121303630
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspa03021]
    121303630
Enzymes [BR:pspa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     121303630
    2.7.11.23  [RNA-polymerase]-subunit kinase
     121303630
Protein kinases [BR:pspa01001]
 Serine/threonine kinases: CMGC group
  CDK family
   121303630
Transcription machinery [BR:pspa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121303630
    Brd4/P-TEFb complex
     121303630
    7SK RNP complex
     121303630
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Pkinase_fungal RIO1
Other DBs
NCBI-GeneID: 121303630
NCBI-ProteinID: XP_041090367
LinkDB
Position
34:complement(4925904..4931360)
AA seq 393 aa
MQRERTGSSGGAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQYNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIT
AEMWTRSPIMQGNTEQHQLTLISQLCGSVTPEVWPNVDKYELYQKLELPKGQKRKVKDRL
KAYVKDPYALDLIDKLLVLDPSQRVDSDDALNHDFFWSDPMPSDLKNMLSTHNQSMFEYL
APPRRRGGHVPQQQANQNRNPATTNQTEFDRVF
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgcagcgagagcggaccggaagctccggtggcgctgagaagcccgaccgggaggccgcc
atcatgtccaaatactacgatggggtggagttccctttctgcgatgagttttccaagtac
gagaagctcgccaagatcggacagggcacctttggggaggtgtttaaagccaagcaccgt
cagactggcaagaaagttgcactgaagaaagtgctgatggaaaatgagaaagaagggttt
ccaataactgccttgagagagatcaagatcctccagcttctgaagcatgagaatgtggtg
aacctgattgagatctgcagaaccaaagccacccagtacaatcgctacaagggaagcatc
tacctggtgtttgacttctgtgaacacgatttggcagggctgctcagcaatgccaatgtc
aagttcaccctagcggaaatcaagaaagtcatgcagatgctgttgaatgggctgtactac
atccacaggaataagattctgcatcgagacatgaaagctgcaaatgtcctgatcacacga
gacggggtcctgaagctggcagatttcggactggcccgagccttcagcctagcaaagaac
agtcagcctaaccgctacaccaaccgcgtggtcactttgtggtaccggcccccggagctg
ctattgggggaacgagactatggcccccccattgacctgtggggagcaggctgcatcacg
gcagagatgtggacccggagccccatcatgcagggcaacactgagcagcaccagctcaca
ctcatcagccagctctgtggctccgtcactcctgaggtgtggcccaacgttgataagtac
gagctgtaccaaaagctggagcttcccaagggtcagaagcggaaggtgaaggaccggctc
aaggcctatgtaaaggacccctatgccctggacctgatcgacaagctcctggtcctggac
ccatcccagcgagtggatagtgatgacgccctcaaccacgacttcttctggtctgacccc
atgccctccgacctcaagaacatgctctccacccacaaccaatcaatgtttgagtacctg
gccccacccagacgcaggggtggacacgtgccccagcagcaagccaatcagaacaggaac
ccggccaccaccaatcagacagaatttgaccgagtgttttga

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