Polyodon spathula (Mississippi paddlefish): 121303720
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Entry
121303720 CDS
T07273
Name
(RefSeq) sodium/calcium exchanger 2-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121303720
04020 Calcium signaling pathway
121303720
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121303720
04261 Adrenergic signaling in cardiomyocytes
121303720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121303720
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121303720
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
121303720
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Others
121303720
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121303720
NCBI-ProteinID:
XP_041090432
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Position
35:complement(5592809..5607283)
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AA seq
861 aa
AA seq
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MFLGVSIIADRFMASIEVITSQEKEVTITKPSGETVVATVRIWNETVSNLTLMALGSSAP
EILLSVIEVCGHGFQAGEMGPGTIVGSAAFNMFVIVAVCVWVIPEGEVRRIKHLRVFFIT
ASWSIFAYIWLYLILAVISPGVVKVWEALLTLSFFPVCVLLAWVADRRLLFYKYTEKRYR
ADQRRGLVVETEGGASPKGVEMMMMMDGKLGAAGEGVEGARGGGAGSQELEENRKEVIRI
LKDLKVKHPDRDLEQLVETANYQALVHQQKSRAFYRVQATRMMIGAGNVLKKHAADQHRR
GADLEGLGGVPGAEEGGPDSTPCSLISFERSHYQCVENCGRLALAVVCHGGEGLNTFYVD
YRTEDGSAHAGSDYEYREGTLVFKPGEERKEIQVGIIDDEVFEEDEHFSVRLLNLRVGDA
EGMFESDPPPSQPPRARLAEPLLATVTILDDDHGGIFGFALRGAARVPESAGTLEVTVQR
SSGARGTVILPYHTEDGTAKGGGVDYEDARGELEFSNDETLKTLQIRIVDDEEYEKHENF
FIVLEEPRWLKRGISALLLNKDPEQALSVEQEDARRIAEMGKPVLGENNKLEVIIEESYE
FKSTVDKLIKKTNLALVIGTHSWREQFIEAVTVRSGNGDEDDEDDEEGGVGGSREEKLPS
CFDYVMHFLTVFWKVLFACVPPTGYWSGWACFLVCISVIGVLTALIGDLASHFGCTVGLK
DAVTAVVFVALGTSVPDTFASKVAAMQDQHADASIGNVTGSNAVNVFLGIGVAWTVAAIY
WAAQGQEFQVEPGSLAFSVTLFTVLAFVAMGVLLLRRGPSIGGELGGPRPARILTCTLFL
GLWLLYILFSSLEAYCHVKGF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgggggtctccatcatcgcagacaggttcatggcatctatagaggtgatcaca
tcacaggagaaggaggtgacgatcacgaagccgagcggggagacggtggtggcgaccgtg
cggatctggaacgagactgtgtcgaacctcactctgatggcgctgggctcttcggcgccg
gagatcctgctctccgtgatcgaggtgtgcggacacgggttccaggcgggggagatgggc
cccggcaccattgtgggctcggccgccttcaacatgtttgtgatcgtggcggtgtgcgtg
tgggtgatccctgagggggaggtgcgtcggatcaaacacctccgagtgttcttcatcacc
gccagctggagcatcttcgcttacatctggctgtacctcatcctcgccgtcatctccccc
ggtgtcgtcaaggtatgggaagccctcctcactctctcgttcttcccggtgtgtgtgctg
ttggcctgggtagctgacaggcggctcctcttctataagtacactgagaagcgatatcgc
gcagaccagcggcgcgggctggtggtggagacggaggggggggcgagccccaagggcgtc
gagatgatgatgatgatggacgggaagctgggggctgcaggcgaaggcgtggagggggcg
cgaggggggggcgcggggagtcaagaactggaggagaaccgcaaagaggtgatccggatc
ctaaaggatctcaaggtgaagcacccagaccgggatctggagcagctggtggagacagcg
aattaccaggcgctggtccatcagcagaagagccgggcgttctaccgcgtccaggccacg
cgcatgatgatcggggcgggcaacgtgctcaagaagcacgccgcggatcagcaccgccgc
ggcgccgacctggagggtctggggggggtcccgggggcagaggagggggggcctgactcc
accccctgcagcctcatctccttcgagcgctctcactaccagtgtgtggagaactgcggc
cggctggcgctggctgtggtgtgccacggaggggaggggctcaacacgttctacgtggac
tacaggaccgaggacgggtcggcccacgcagggtccgattacgaatacagagaggggacc
ctggtgttcaaacctggggaggaaaggaaagagatacaggtggggatcatcgatgacgaa
gtctttgaggaggatgagcacttctccgtgcggctgctgaacctgcgcgtgggcgacgct
gagggcatgttcgagagcgaccctcccccctcgcagcccccccgcgcgcggctggctgag
cccctcctcgccaccgtcaccatcctggacgacgaccacggtggcatcttcggcttcgcg
ctgcggggggccgcgagggtcccggagagcgcggggaccctggaggtgacggtacagcgc
agctctggagccagggggaccgtcatcctgccctaccacactgaggacgggaccgccaag
gggggcggtgtggactacgaggacgcgaggggggagctggagttcagcaacgacgagacg
cttaagaccctgcagatccgcatcgtggatgacgaggagtatgagaaacacgagaacttc
ttcatcgtcctggaggagccgcgctggctgaagaggggaatctccgctctcctgctgaac
aaagaccctgagcaggctctctctgtggagcaggaggatgcgcgcaggattgcggagatg
gggaaaccagtgctgggggagaacaacaaactggaggtgatcatcgaggagtcgtacgag
ttcaagagcacggtggacaagctgattaagaagacgaacttggcgctggtgatcgggact
cactcctggagggagcagttcatagaggccgtgaccgtccgctcaggtaatggtgatgag
gatgatgaggatgatgaggagggcggtgtggggggctctcgtgaggagaagctgccctcc
tgctttgactacgtgatgcacttcctcacggtgttctggaaggttctgttcgcctgtgtg
ccccccacggggtactggagcggctgggcctgcttcctggtgtgcatctccgtcatcggg
gtgctgaccgcgctcatcggagacctggcctcgcacttcggctgcaccgtggggctcaag
gacgccgtcaccgccgtggtgttcgtggctctcgggacctccgtgccagacacctttgcc
agtaaggtggctgcgatgcaggaccagcacgcggacgcctcgatcgggaacgtgacaggc
agcaacgcggtcaacgtgttcctggggattggcgtggcctggaccgtggcggccatctac
tgggcagcgcaagggcaggagttccaggtggagccgggctccctcgccttctccgtcacg
ctcttcaccgtgctggccttcgtggccatgggcgtgctgctgttgaggaggggcccctcg
atcgggggggagctgggggggccgcgccccgcccgcatcctcacctgcacgctcttcctc
gggctctggctcctctacatcctcttctccagcctggaggcatactgccacgtgaagggc
ttctag
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