KEGG   Polyodon spathula (Mississippi paddlefish): 121303775
Entry
121303775         CDS       T07273                                 
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pspa04515]
    121303775
   04990 Domain-containing proteins not elsewhere classified [BR:pspa04990]
    121303775
Cell adhesion molecules [BR:pspa04515]
 Immunoglobulin superfamily
  SALM family
   121303775
Domain-containing proteins not elsewhere classified [BR:pspa04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   121303775
SSDB
Motif
Pfam: LRR_8 I-set Ig_3 LRR_4 ig Ig_2 fn3 LRR_9 Ig_DSCAM-DSCAML_C DC_STAMP Sp38 C2-set_3 C2-set_2 GlyL_C
Other DBs
NCBI-GeneID: 121303775
NCBI-ProteinID: XP_041090486
LinkDB
Position
35:3946238..4018342
AA seq 762 aa
MERIVFCVLMFGVLVKAHNCPGRCICQNISPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITVIRRKDFLNMTSLVHLTLSRNTISQIMPHAFMDLRALRALHMDGNRLNSLKNEHFK
GLGNLRHLILGNNQIHHVASATFDEFLGTIEDLDISYNNLETLPWEAIARMTNINTLTLD
HNLIDHIEEGTFSLLHKLVRLDMTSNRLHKLPPDTLFLRAEVLANAEVSNPSTLTVSFGG
NPLHCNCELLWLRRLTREDDLETCASPVALMDKYFWSIQEEEFICEPPLITRHHASKAYV
MEGQGVTLKCKAIGDPDPSIHWISPDGKLIHNTSRTVLFDNGTLDIFITTLKDSGSFSCI
ASNAAGEATAPVEVNIVPLPLFVNNTSHMKEPDPGLSDITTSSKSSSNDTKNQDKKVVVG
ELTSSSVVIWWPSERHIPGIRMYQIQYNSTSDDTLVYRMIPSTSKTFLVNDLAGGREYDL
CVLAVYDDGITSLTATRVVGCVQFSTASENSQCKFIHSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKVYNNQDDHTSAKVSNVYSQTSGNLAVMHRSSSKQAEEKNEIWAKEAANKDC
KALVLKVDCEKSEAPQPTTTVITEVQLSLVPIERRRTLTSVDLQQAAAILSSEDAQTDSS
IVGSTISLCLIGSSNGNKDAPKRRDKKSALGSNTLLPSNIARTRHRFSFDGDYSLFQSNS
YPRRARTRRHMSSTQINVDVASPLGNRRVIFSSTEWMLESTV
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggaaaggattgtcttctgcgtgttgatgtttggcgtgttggtgaaggctcataactgc
cctggtcgctgcatctgccagaatatctcccctaccctgactttgctctgtgccaaaacg
ggactcctgtttgtgccgcctaccatcgaccgcaaaaccgtggagctacgcttgacggac
aacttcatcaccgttatacggaggaaggactttctcaacatgaccagcctggttcatctc
accctgtctaggaacaccatcagtcagatcatgcctcatgctttcatggacttgagagcc
ctccgcgccttgcacatggatggcaaccggctcaactccctgaagaacgagcacttcaag
ggtctcggcaacctgcgtcacctcattttagggaacaaccagatccaccatgtggcttcc
gccacgtttgatgagtttcttgggaccattgaagacttggatatctcgtacaacaaccta
gagaccctcccttgggaggctattgccaggatgaccaacatcaacaccctcacgttggat
cacaatctgatagatcacattgaagaagggaccttttccttgcttcacaagctggtcagg
cttgacatgacttcgaaccggctgcacaagctgccgccagacaccctcttcctgcgcgct
gaagtcttggccaacgctgaggtgtccaatccttccacattgacagtcagctttggtggg
aaccccttacactgtaactgtgagttactttggctcaggaggcttaccagggaagatgac
ttggagacatgtgcttcccccgtcgcccttatggataaatacttctggtccatccaagag
gaggagttcatctgtgaacctccattgatcactagacaccacgcctctaaagcctatgtc
atggaagggcaaggggtgaccttgaagtgcaaagctattggagatccagacccttccatc
cattggatctctcccgatgggaaactcattcacaacacctctaggaccgtcctcttcgac
aacgggactttggacatcttcatcaccacccttaaggatagtgggtctttcagctgcatc
gcctccaacgctgccggggaagcaactgcccccgtcgaggtcaacattgttcccttgccc
cttttcgtcaacaacaccagccacatgaaggagcccgaccctggcttgtccgacatcacc
acctcgtccaaatcaagctccaatgataccaagaaccaagacaagaaggtggtggtcgga
gagctgacctcatcttctgtcgtcatctggtggccttctgagcgtcacatccctggcatc
cgcatgtatcagatccaatacaacagcacctctgatgacacattggtttacaggatgatt
ccatcaactagcaagaccttcctagtgaatgacttagcaggaggtcgggaatatgacctc
tgtgtcctagctgtctatgacgacgggatcacctctctgacggccaccagagtggtgggc
tgtgtccagttctccacagccagcgagaacagccagtgcaagttcatccacagtcagttc
cttggaggaaccatgatcatcatcattggaggcatcatagtggcttcagtcctggtcttc
atcatcattctgatgatccgttacaaggtctacaacaaccaagacgaccacacctcagcc
aaagtgagcaacgtctactcccagaccagcggaaacctagctgtcatgcatcgttcctcc
tccaagcaagcagaggagaagaatgagatctgggctaaggaggccgccaacaaagactgc
aaggctctggtcttgaaagtggattgcgagaaatcagaggctccccagcccaccaccact
gtcatcactgaggtccagctgtctctggttccaatagaaaggaggcggaccctgaccagt
gtagacctccagcaagcagcagctatcctgtcttcagaggatgcccagacggacagcagc
atagtgggttccaccatatcactctgcttgataggttcctccaacggcaacaaagatgca
cccaagcgtagggataaaaagagtgccttgggtagcaatactctccttcccagcaacatt
gcaagaactcggcacaggttctcctttgacggggactactcgttgtttcagagtaacagt
taccccagaagggcaaggacaaggagacacatgtcctctacccagataaacgtggacgtg
gcttctcctttgggaaaccggagggtgatctttagcagcacagagtggatgttggaaagc
acggtttga

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