Polyodon spathula (Mississippi paddlefish): 121303795
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Entry
121303795 CDS
T07273
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121303795
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121303795
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
EGF_3
TB
hEGF
Plasmod_Pvs28
Lantibiotic_a
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
121303795
NCBI-ProteinID:
XP_041090509
LinkDB
All DBs
Position
35:complement(4571979..4608734)
Genome browser
AA seq
1918 aa
AA seq
DB search
MNRDMDLLRSALLFYFFAFFPSPARNQNPAGERIKVLFTPTICKVRCIGGRCTNHCERGN
VTTVYSSERGHSAPGDGFRVFLCPLLCQNGGICMQKDRCLCPPNFTGKFCHIPVSSSTNE
IEGAAQNEAASSNKKGLTQSVYTLPLHSHQSQQSGGSEVVKVHVQHPLEVSVNIHQVQRV
REGPVQEQGDASTHRRVPVPRIQAQTIRGDSSYSESSGFGYCFQEVRNGQCSSPLPGLRT
QEICCLGQGKAWGISECALCTSNQGSGAGVEGGCPKGFERINGTQCVDVNECSLPGFCQN
GECINTRGSYSCVCKTGYILDASQGRCISHMVISELKGQCYRILKMGFCTLPILRDITKQ
ICCCSRVGKAWGRTCERCPPFGSEEFKEICPAGPGYHYSASSVKINQERQTPVAPPRDQK
PPLTLNVGNEREVRLPPRTERPVQLIQPVRPVQPVQTSTVTTITHAATRAPEVRVCDLNP
QICGAGRCLKQRGGTYTCLCNQGYHINPQQTRCVDVDECSLSPRPCTNGQCENTAGSYRC
LCQSGFRLGPQGASCTDTDECRQSPSPCTNARCENTPGSYRCVCAAGYQLDHQGAECTDI
NECENALTCPGQECVNSAGSFQCVRCQPGYKLQNGRCTDVNECSLSPRPCTNGQCENTAG
SYRCLCQSGFRLGPQGASCTDIDECRLTPRPCSIGQCENTAGSYRCVCPIGYKLNSQATQ
CVDVDECSLSPRPCTNGQCENTAGSYRCLCQSGFRLGPQGASCTDTDECRQSPSPCTNAR
CENTPGSYRCVCAAGYQLDHQGAECTDINECENAAACPGQECINSAGSFQCVRCQPGYKL
QNGRCTDVDECSLSPRPCTNGQCENTAGSYRCLCPTGFRLGPQGASCTDTDECRQSPSPC
TNARCENTPGSYRCVCAAGYQLDHQGAECTDINECENALTCPGQECVNSAGSFQCVRCQP
GYKLQNGRCTDVNECSLSPRPCTNGQCENTAGSYRCLCQSGFRLGPQGASCTDIDECRLT
PRPCSIGQCENTAGSYRCVCPIGYRLNSQATQCVDADECRQSPSPCTNARCENTPGSYRC
VCAAGYQLDHQGAECTDINECENALTCPGQECVNSAGSFQCVRCQPGYQLQNGRCTDVDE
CRGLSVCGTNGQCLNTDGSFRCDCKIGFRSDSSGRQCRDINECLEGDFCFPHGECLNTEG
SYSCLCSEGYKATPDRGFCIDVDECARPELCQDGSCTNTLGSFECACQPGFATNPEKTAC
LDVDECAESRGAVCGPRRCENTIGSFHCITSCEPGHRVTASGDCVDINECANNTVCGDHA
FCQNLIGSYQCLCDQGYEAGRNGQTCVDVNECDSMQGACGAARCENVEGSFLCICGRDSE
EFDPRTGQCISRNGEAQRLPTGGAPRPEPSLPRSDVRECYYNTRDANVCQNVLKRNTTLQ
ECCCTVGEAWGVNCQLTPCPAPGTAEYQSVCPSGKGYVTSALGSFSYKDVDECTLFSAAV
CKNGVCVNTIPGYSCYCPNGYYYDQTQLECVDNDECLEEESCLGGSCVNTMGSYYCSCES
PLILDAAQRECIANISQSADENLAYCWQELGEDLICNRPLLDRQITYTECCCLYGLAWGI
ECALCPAQDSDDYEALCDVLRSPAYGPPDEPYAGEYGPGFRGEYEPPYSTDTFAEPPPRG
RTPDYLRPGRYEDYPSRGGRLPSYGSRSRSAASYGPPEESPYRRSGPSQSYDLGDFEPEL
PYASEPRPPFGRAEPQVDPSYESRRGRYRPLSPQSAGPPFEPDEPSAPWLQYRPRGTAPY
PEYPDRPLGGIRRETYESRYEQYESLSAEECGILHGCENGRCIRVPEGYTCDCYDGYHLD
ITTMTCRDINECEEADEPSIQCVNGQCLNTDGSYQCVCLRGFVMSRQRNYCIPARPGQ
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagacatggacctgcttcgatctgccctgctgttttacttctttgcctttttc
ccctccccagccaggaatcaaaaccctgcgggcgaacgcattaaagtgctgttcactcca
accatctgcaaggtgcgttgcatcgggggtcgctgtaccaaccactgtgagagaggcaat
gtcaccaccgtctatagctctgagagggggcattcagcccctggagatggcttcagagtc
ttcttatgcccgctgctgtgtcagaatggcggaatttgtatgcagaaggaccgctgtctc
tgccccccgaattttacagggaaattctgccacatcccggtctcctcctcaaccaatgag
attgaaggggcagcccagaatgaagcggcatcttccaataagaagggactgacccagtct
gtgtacaccctcccactgcacagccaccaatcacagcaaagtggaggctcggaggtggtg
aaggtgcatgtgcagcaccccctagaggtcagcgtgaacatacatcaggtgcagcgtgtg
agagaggggccggtgcaggagcagggcgatgccagcacacacaggagggtgccggtgccc
aggatccaggctcagaccatccgtggagactccagctactcagagtcatccggattcgga
tattgcttccaagaagtccggaacggccagtgcagctcccctctgcctggactgaggaca
caggagatctgctgcctaggtcaggggaaggcatggggcatcagtgaatgtgccctgtgt
acatccaaccaggggagtggtgctggtgtggagggaggctgtccgaagggttttgagagg
atcaatggaacacagtgtgtggatgttaacgagtgctcgctgcccgggttctgtcagaac
ggggaatgcatcaacacacgaggaagctacagctgtgtctgcaagacaggctacatactg
gatgcttctcaaggtcgctgcatttcccacatggtgatctcagagttgaaggggcaatgt
tacagaatcctgaagatggggttctgcacgctgcccatcctaagggacatcaccaagcag
atctgctgctgcagcagagtgggcaaagcctggggccggacctgcgagaggtgcccgccc
ttcggatcagaggaatttaaggagatttgcccagcagggccaggttaccactactcagct
tccagtgttaaaatcaaccaggagcggcaaactccagtggcgccccctagagaccaaaag
ccccctctgactcttaatgtgggcaacgagagagaggtgaggctgccaccgagaacagag
agaccagtgcaactaatccaaccagtaagaccagtacaaccagtacagacatccaccgtc
accaccattacccacgctgcaacacgtgccccagaagtgcgagtgtgtgacctgaaccct
cagatctgtggagcggggcgctgcctaaagcagagaggaggaacctacacctgtctctgc
aaccagggctaccacatcaacccccagcagacacgatgcgtggatgtagatgagtgcagt
ctgagtccacggccctgcactaatggtcagtgtgagaatacagctgggagttaccgatgc
ctgtgtcagtctgggtttagactggggccgcaaggagccagctgcacagatacagacgag
tgccggcagtcccccagcccctgcactaacgcacgctgtgagaacacgcccggcagctac
aggtgtgtctgcgctgctgggtaccagctggatcaccagggagctgagtgcacagatatc
aatgagtgtgagaatgctttaacctgccctggtcaggaatgtgttaattccgctggctcc
ttccagtgtgtgcgctgccagcctggttacaagctacagaacggcagatgtacagatgta
aatgagtgcagtctgagtccacggccctgcactaatggtcagtgtgagaatacagctggg
agttaccgatgcctgtgtcagtctgggtttagactggggccgcaaggagccagctgcaca
gatattgacgaatgccgcctgacgccacgaccttgctccattggccaatgtgagaacaca
gcgggcagctatagatgtgtgtgtcccatcggctacaaactgaactctcaggcaacccag
tgcgtagatgtagatgagtgcagtctgagtccgcggccctgcactaacggtcagtgtgag
aatacagctgggagttaccgatgcctgtgtcagtctgggtttagactggggccgcaagga
gccagctgcacagatacagacgagtgccggcagtcccccagcccctgcactaacgcacgc
tgtgagaacacgcccggcagctacaggtgtgtctgcgctgctggataccagctggatcac
cagggagctgagtgcacagatatcaacgagtgtgagaatgctgcagcctgccctggtcag
gaatgtattaactccgctggctccttccagtgtgtgcgctgccagcctggttacaagcta
cagaacggcagatgcacagatgtagatgagtgcagtctgagtccgcggccctgcactaac
ggtcagtgtgagaatacagctgggagttaccgatgcctgtgtccgactgggtttagactg
gggccgcaaggagccagctgcacagatacagacgagtgccggcagtcccccagcccctgc
actaacgcacgctgtgagaacacgcccggcagctacaggtgtgtctgcgctgctgggtac
cagctggatcaccagggagctgagtgcacagatatcaatgagtgtgagaatgctttaacc
tgccctggtcaggaatgtgttaactccgctggctccttccagtgtgtgcgctgccagcct
ggttacaagctacagaacggcagatgtacagatgtaaatgagtgcagtctgagtccgcgg
ccctgcactaatggtcagtgtgagaatacagctgggagttaccgatgcctgtgtcagtct
gggtttagactggggccgcaaggagccagctgcacagatattgacgaatgccgcctgacg
ccacggccttgctccattggccaatgtgagaacacagcgggcagctatagatgtgtgtgt
cccatcggctacagactgaactcacaggcaacccagtgcgtagatgcagacgagtgccgg
cagtcccccagcccctgcactaacgcacgctgtgagaacacgcccggcagctacaggtgt
gtctgcgctgctggataccagctggatcaccagggagctgagtgcacagatatcaatgag
tgtgagaatgctttaacctgccctggtcaggaatgtgttaactccgctggctccttccag
tgtgtgcgctgccagcctggttaccagctacagaacggcagatgtacagacgtggatgag
tgtcggggcttgtcagtctgcggcactaatgggcagtgcttgaacacagacggctccttc
cgctgtgactgcaagatcggattcaggtcagacagcagtgggcgacagtgcagggatatc
aacgagtgtctggaaggggacttctgtttcccgcacggcgaatgtctcaacactgaaggg
tcgtacagctgtctgtgttccgaaggatacaaagccaccccagacagaggcttctgtata
gatgtggatgagtgtgccaggccggagctgtgccaggatggcagttgtaccaacaccctg
ggctccttcgagtgtgcgtgccaacccggctttgccaccaatccagaaaagactgcctgc
cttgacgttgatgagtgtgcagagtcgaggggagcggtgtgtggaccccgacgttgtgag
aacaccatcggctccttccattgcatcacttcctgtgagcccggccacagggtcactgcc
agtggggactgtgtggatatcaacgagtgtgcgaacaacaccgtctgcggtgaccacgcc
ttctgccagaacctgattggctcgtaccagtgtttgtgtgaccagggctacgaggcagga
cgaaatgggcagacctgtgtggatgtgaatgagtgcgacagcatgcaaggtgcctgcggg
gcagcgcgctgtgaaaacgtggagggttccttcctgtgtatctgcggccgggacagtgag
gagttcgacccccgaacgggacagtgcatcagccggaatggggaagcccagaggcttccc
actgggggagcacctagaccagaaccctcccttccacgcagtgatgtcagagagtgctac
tacaacacccgtgacgcaaacgtgtgccaaaacgtactgaagcgcaacaccaccctacag
gagtgctgctgtactgtgggggaggcctggggggtgaactgtcagctgactccctgtccg
gcacctggaacagctgaataccagtctgtgtgccccagcggaaagggatatgtgacctct
gctctgggctccttcagttacaaagatgtagatgagtgcacacttttcagtgctgcagtg
tgtaagaatggcgtgtgtgtgaacacgatcccgggctactcctgctactgtcccaacgga
tactactacgatcaaacgcaactggagtgcgtggataacgatgagtgtttggaggaggag
tcctgtctgggagggagctgtgtcaacactatgggctcgtattactgctcctgcgagtcc
cctctcatcctggacgcagcccagcgagagtgcatcgctaacatcagccagtctgccgat
gaaaacctggcatactgctggcaggagttaggagaagatttaatttgcaaccggccgttg
ctggataggcagatcacttacacagagtgctgttgcctgtatggactggcctggggtata
gagtgtgcactctgccccgcccaagactcagatgattatgaagccctgtgtgacgtcttg
agatccccagcttatggaccccctgacgagccctatgctggggaatatggaccaggcttc
aggggggaatacgaacctccatacagtaccgacacctttgctgaaccccctcctagaggc
agaaccccagactatctcagacccgggaggtacgaagactacccctcccgtggaggtagg
ctgccaagctacgggtcacgctctcgctccgcggcttcatacggaccacccgaggagagc
ccatacagacgcagtggccccagtcagagctacgatctgggggatttcgaacctgagcta
ccctatgcctcagagcccagacccccctttggcagagcggagccccaggtagatccctct
tacgaatcccgtcgagggaggtacagacccctgagcccccagtctgcgggaccccccttt
gagccagacgagccctcggccccttggctgcagtacagacccagagggacggccccctac
ccagagtaccctgaccggccactggggggcatcaggagagagacctatgagagcagatac
gagcagtacgagagcctgagcgcggaggagtgcgggatactgcacggctgtgagaatggc
cgctgcatccgagtgccggagggctatacctgtgactgctatgacggttaccacctggat
atcactacaatgacttgcagagatataaacgagtgtgaggaggcggatgagccctccatc
cagtgtgtgaacggacagtgtctcaacacagacggctcctatcagtgtgtttgcctccgt
ggctttgtgatgtcaagacaacgcaattactgcatcccggcacgaccagggcagtga
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