Polyodon spathula (Mississippi paddlefish): 121303813
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Entry
121303813 CDS
T07273
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121303813
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121303813
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121303813
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121303813
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121303813
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121303813
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121303813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
TrmB
Motif
Other DBs
NCBI-GeneID:
121303813
NCBI-ProteinID:
XP_041090546
LinkDB
All DBs
Position
35:complement(1766639..1782554)
Genome browser
AA seq
653 aa
AA seq
DB search
MSALLLREMEERTLHQPKRGGEDPGNGRSFLLVDENENLQVRDELDFLERLDCRAVEGVK
VLSIFGNTGDGKSHTLNHCLFGGEEVFPTSPLQDSCTVGVWAAFEPALGLVALDTEGLLG
ASGNQNQRMRLLLKVLAVSDVVVYRTRAERLHNDMFQFLGSASSAYLRHFTRELRALSSR
CGLEVPLSSLGPAIIVFQETSRTRLLGWESSTPGQGDILLQKRFHELGLSTEAFSSVQYV
GTQTVSPPTDYSGLLSTLKQQVRNTATRSPRPPAIVYSVLQALSERFSGEISDEKVNLYC
FFPDEYFTCSFVCLSCGVRCKNGMNHLRDNIPHLAEGLCQYAHQYNNKVLICKKCYEGGR
EVIVIPKTSASNENPWLGLAMYAWSGYVLECPCCGIIYRSRQYWIGNQDPESCVVRPEVK
HVWPGSETFLTDHQNAAQRMLDGMNFVIQSVSDYSSGPTKAVTAWITDQVAPPYWRPNAD
ITACSGCKKLFEEPERKHHCRACGEGFCQACSSKTMPVPERGWGSAPVRVCDFCYRQGGG
GSDVPRTEPVGLMARKVTEVAQSTVDFVSTAIDYPLGFVKGVARPDYWVPDHEIQQCGHC
SKALSPRMSKHHCRACGGGFCAQCSSERRPVPSRGWDHPVRVCIRCSQNKGDL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcttctgctcagagaaatggaggagcgcactctacaccaaccgaaaaggggc
ggcgaggacccggggaacggcaggagtttcctcttggtggacgaaaacgagaatctgcag
gtacgggatgagctggatttcctggagaggctggattgccgggcagtggagggggtcaag
gtgctctccatcttcgggaacacgggcgatgggaagtcccacacgctgaaccactgcctg
ttcggcggagaggaagtgttccccacctcacctctgcaggactcctgcaccgtgggtgtg
tgggcagccttcgagcctgcgctggggctggtggcgctggacacggaggggctcctgggc
gccagcggcaatcagaaccagcggatgagactgctgctcaaggtgctggcggtgtcggac
gtggtggtctaccgcacgcgggccgagcggctgcacaacgacatgttccagttcctgggc
agcgcctccagcgcctacctgcgccacttcacccgcgagctccgtgccctgtcaagccgc
tgcgggctagaggtacccctgtccagcctgggcccagccatcatcgtcttccaggagacc
tcccgcaccaggctgctcggctgggagagcagcacgcccggtcagggggacatcctgctg
cagaagcgcttccatgagctggggctgtccaccgaggcgttcagctccgtgcagtatgtg
ggcacgcagaccgtcagcccccccacagactactcggggctgctgagcaccctcaaacag
caagtgaggaacacagccacgcgctcgcccagaccccctgccatcgtctacagcgtactg
caggctctgagtgagcggttcagcggagagatctcggatgagaaagtcaatctgtactgc
ttcttccctgacgagtatttcacctgctccttcgtctgtctgagctgcggggtgcgctgc
aagaatggcatgaatcacctgagagacaacattcctcacctggctgagggcctgtgccag
tatgcacaccagtacaacaacaaggtgctcatctgtaagaaatgctacgaaggaggcagg
gaggtgattgtgatccctaaaacatcagcgtccaatgagaatccctggcttggactggcc
atgtatgcctggtcagggtacgtgctggagtgcccgtgctgtgggattatctaccgcagc
cggcagtactggattgggaaccaggatccggagagctgcgtggtgcggcccgaggtcaag
cacgtctggcccgggagcgagacgttcttgacggaccatcagaacgcagcgcagcgcatg
ctggacgggatgaactttgtgatccagtctgtctctgattacagctctggacccaccaaa
gctgtcacagcctggatcactgaccaggtggcgcctccctactggagaccaaatgcagac
attactgcgtgctcggggtgtaaaaagctgtttgaagagcctgagaggaagcaccactgc
cgggcctgtggggagggcttctgccaggcctgctccagcaagaccatgccggtgccagag
aggggctggggcagcgcgcccgtccgtgtctgcgatttctgctaccgccaaggaggaggg
gggagcgacgttcctaggactgagccggtgggtctgatggctcgcaaggtgacagaggtg
gctcagagcacggtggactttgtttctactgcgatagactatcctctcggtttcgttaag
ggagtggcccggcctgactactgggttccagaccacgagatccagcaatgtgggcactgc
agcaaagcgctctcccccaggatgtcgaaacaccactgccgggcctgcgggggcgggttc
tgtgcccagtgctcgagcgagcggcgcccggtgccgtcccgcggttgggaccaccctgtg
agggtctgcatccgctgcagccagaacaaaggggatctgtag
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