Polyodon spathula (Mississippi paddlefish): 121303822
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Entry
121303822 CDS
T07273
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
pspa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121303822
04371 Apelin signaling pathway
121303822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121303822
CD molecules [BR:
pspa04090
]
Proteins
121303822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
DSL
EGF_DL_JAG
EGF_CA
JAG1-like_EGF2
EGF_2
EGF_Teneurin
EGF_3
FXa_inhibition
TMEM154
Cadherin_C_2
MscL
Motif
Other DBs
NCBI-GeneID:
121303822
NCBI-ProteinID:
XP_041090557
LinkDB
All DBs
Position
35:2204725..2255647
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AA seq
685 aa
AA seq
DB search
MCERELRHLTTVCAVLVTLHAQVLLAAGSFELQIKQVQNRNGVLWSGECCGGASTGGRCS
LGDQCNTFFRVCLKEYQLRVSATGPCIFGTGATPVLGGNSFSLRHQPHSEHDARILIPFQ
YAWPRSYSLILEALDYNNSTSGPALEQLIERVTHSGMLNPGEWQPLRHHGRVASVEYKVR
VHCGENYFGPFCNKFCRARDDFFGHHVCDAGGNRVCSEGWMGAECRQAICKQGCHPVHGY
CKQPGECRCHYGWQGPNCEECVTFPGCVHGSCTEPWKCVCDTNWGGLLCNKDLNYCGTHQ
PCLNSGTCVNTEPNEYQCICEEGFRGRGCEIVEHACLSSPCANGSTCVEDSSGFQCLCPA
GWTGPTCTEETDECGPSPCAHGGTCQDLHNGFQCSCPPQWTGKTCQLDADECELQLCVNA
LACRNLIGGYFCDCAPGWSGQNCDMRIDPCPGECQHGGQCEDSPSGYRCHCLPGYTGLYC
QTRLGECASAPCLNGGLCSDLEVGFLCHCAMGFTGKHCEVVLDLCSSNPCQQESLCQSTE
GGYLCACPEGYEGKDCMRLKDPCHGVHCQGSQGTLYLIIILLSVLAVLVISLCIFLIVRH
HRRRKDSQRSPPDESINNQREYINLIRNLPKPEEIELALPPPPSAPLPEKKLLMQGSEVP
KVDISNLEREKLNHFHCPDWEEPEV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaagggagttgcggcacctgacaacagtgtgtgccgtcctggtgacactgcac
gcccaggtgctgctggctgccggcagcttcgagttgcagatcaagcaggtgcagaaccgc
aatggagtgctgtggagcggggagtgctgtggaggagcatccaccggggggcgctgttcg
ctgggcgatcagtgcaacacctttttccgggtctgtctcaaggagtaccagctgagagtg
tccgccacggggccctgcatcttcggcacgggggccacgcctgtcctgggtgggaacagc
ttctctttgagacaccagcctcacagtgagcacgacgcgcgcattctcatccccttccag
tacgcctggccgagatcgtactccctgatcctggaagctctggactataataacagcacc
tccgggccagctctggagcagctgattgagcgggtgactcactcaggtatgctgaaccct
ggcgagtggcagcccctgcgtcaccacggccgagtcgctagcgtggaatacaaggtgcgc
gtccactgcggggagaactacttcggaccgttctgcaacaagttctgccgggctcgcgat
gacttcttcgggcaccacgtctgcgacgccgggggaaaccgggtctgcagcgagggctgg
atgggagcggagtgccggcaagctatttgcaagcaaggctgtcacccggtgcatgggtac
tgcaagcagcctggagagtgcaggtgtcactatggctggcagggtccgaactgtgaggag
tgtgtcacgttcccgggctgtgtgcatggctcctgcacagaaccctggaaatgtgtgtgc
gacaccaactggggaggcttgctgtgcaacaaggatctgaattactgtggcactcaccag
ccctgtctgaacagcggcacctgtgtcaacactgagcccaatgagtaccagtgtatctgt
gaggagggcttccgagggcgaggctgtgagatcgtggagcatgcctgtctgtccagcccc
tgtgctaatggaagcacctgcgttgaagactcttctggattccagtgcctgtgtcctgct
ggctggactggacccacctgcacggaggagacagacgagtgcgggcccagcccctgtgcc
cacggcgggacttgccaggacctgcacaatggatttcagtgcagctgcccgccacagtgg
actggcaagacctgccagctggatgctgacgagtgtgagctgcagctgtgcgtgaacgcg
ctggcctgcaggaatctcattggaggatatttctgtgactgcgctccagggtggagcgga
cagaactgtgacatgcggatcgatccctgccctggagagtgccagcatggggggcagtgt
gaggactcgccgagtggctacagatgtcactgcctgccgggatacacagggctgtactgc
cagaccaggctgggtgaatgtgctagcgccccctgcctgaatggaggtctctgttcagac
ctggaggttggattcctgtgccactgtgcaatgggtttcactggcaaacactgtgaggtg
gtgctggacctttgcagttccaacccttgccagcaggagtcgctgtgtcagagcaccgag
ggcggctatctgtgtgcctgtcccgagggttacgaaggcaaggactgcatgcgcctgaag
gacccctgccatggagtgcactgccaaggctcccaggggaccctgtatctgatcatcatc
ctgctgtcagtgctggcagtcctggtcatctctctctgcatctttctgatcgtccgccat
catcgccggagaaaggacagtcaacgcagcccgcccgacgagagcatcaacaaccaacgc
gagtacatcaacctgattaggaacctgcccaaacccgaggagattgagctggccctgccg
ccacccccctccgctccccttcccgagaaaaagctcctgatgcagggctccgaagtgccg
aaagtggatatctccaacctggagcgtgagaaactcaaccacttccactgcccggactgg
gaggagccggaggtgtga
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