Polyodon spathula (Mississippi paddlefish): 121303859
Help
Entry
121303859 CDS
T07273
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121303859
04121 Ubiquitin system [BR:
pspa04121
]
121303859
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121303859
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Atypical E3
121303859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121303859
NCBI-ProteinID:
XP_041090627
LinkDB
All DBs
Position
35:complement(4774715..4779165)
Genome browser
AA seq
610 aa
AA seq
DB search
MSSAGQATSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGIDRIEILIETARQLKRT
HVMQDGRSPGPQAGKHGPGGKEGSLEGGRQSVERYERGRGEYGVSQRLPNGLPRPEDGGP
AEASRQSPNLRRGIVGAVPSSLVAQGLVGTHHGLLAAIPGLNTRGGGTSLTITGPILGEI
GKRGAQVAPGPLAGDYEKELKEKQRSAEALAELSESVRSRGEEWAGRPKQVRETLLALSS
CAPFNVRFKKDHAVAGRIFAFDVKPGLDLELKVFTEYPCGSGNIFSSLLGLAKQMFHDCM
KDTGKVISSGFKYVEYEKRHGNGEWRLLSEFLSDPVRAFKDPPAHELFPQPYLDPSFPML
PTALCGLGRNMPPRGGVRRRKASPESESGDAGRMGEEHRQHWLPVSSGGVYAGVPHLLTS
AAGQPQDGEPSPITALMSVADSLGAGQSPKDATSSAATSSANSSLVHSAPAGQHRRLAGS
RNGDQQQQQQQVQGPSSNSNSSSSLPGASSSEQSTGVEASGASGIPLCCTICHERLEDTH
FVQCPSVANHKFCFPCTRDFIRAQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAG
DVKVKKERDP
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgctggtcaagcgacttccagacggcagtggtgctacctgtgtgatttgccc
aagatgccctgggctatgatttgggacttcagcgaggcggtgtgccgcggttgcgtcaat
tacgaaggtattgacaggattgagattcttatcgaaactgccaggcagttaaaacgaact
cacgtcatgcaggacgggaggtctccggggccccaggccgggaagcacggcccaggcggc
aaagagggctccctggaaggagggaggcaatccgtggagaggtatgagagagggagaggg
gaatatggggtttcccaaaggctgcccaatgggcttcccaggcctgaagatggggggccc
gcagaagcaagcagacagagccccaatcttagaaggggcatcgttggggctgtgccctcc
agtctggtggcacaggggctggtgggcacccatcacggcttgctggcagcgatcccgggt
ttgaataccaggggaggaggcacctctttgaccatcaccggcccgattttgggagaaata
ggcaagcgaggggcccaggtggcgccgggcccccttgcgggcgactatgagaaggagctg
aaggagaagcagaggagcgcagaggccctggccgagctgtcggagagcgtgcgcagccgg
ggcgaggagtgggctggccggcccaagcaggtgcgcgagaccctgctggccctgtccagc
tgcgcccccttcaacgtgcgcttcaagaaggaccacgctgtggcggggcgcatcttcgcc
ttcgacgtcaagcccggcctggatttggagctcaaggtcttcactgagtacccgtgcggc
tccggcaacattttctccagtctcctgggtctggccaagcagatgttccacgactgcatg
aaagacaccggcaaggtcatcagctccgggttcaagtacgtggagtacgagaagaggcac
ggcaacggagagtggcggcttctttccgagttcctgtcggacccggtccgggctttcaaa
gaccccccggcccacgaactcttcccccagccctatctagaccccagcttccccatgctg
ccaaccgccttgtgcgggcttggccggaacatgcctcccagagggggtgtgcgccgccga
aaagcttcaccggaatcggagagcggggacgcggggaggatgggggaagagcacaggcag
cactggctcccggtttcctcggggggcgtgtatgcaggcgtgccccacttgctgacctcc
gcagctggccagccccaagacggggagccctctcccatcacggctctcatgagcgtggca
gacagcctgggcgcagggcagtccccgaaagacgccacctcttctgcggccacttcctcc
gccaacagcagcctggtccattccgccccggccgggcagcaccgaagactggccggctct
agaaacggagaccagcagcagcagcagcagcaggtccaaggaccttccagtaacagcaac
agcagcagctccctccctggagcgtccagcagtgagcagagcacaggagtagaagcatca
ggggccagcggcattccactctgctgcaccatctgccacgagagactggaagacacccac
tttgtccagtgtccttccgtggccaaccacaagttctgcttcccctgcacccgggatttc
atcagggcgcagggggcgagcggggaggtttactgccccagtggggagaagtgccccctc
gtggggtccaacgtgccctgggctttcatgcaaggggagatcgccaccatcttagcagga
gacgtcaaggtgaagaaggagcgtgacccttga
DBGET
integrated database retrieval system
