Polyodon spathula (Mississippi paddlefish): 121303883
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Entry
121303883 CDS
T07273
Name
(RefSeq) metastasis-associated protein MTA1-like
KO
K11660
metastasis-associated protein MTA
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121303883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121303883
03036 Chromosome and associated proteins [BR:
pspa03036
]
121303883
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121303883
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
121303883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
Myb_DNA-binding
GATA
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121303883
NCBI-ProteinID:
XP_041090673
LinkDB
All DBs
Position
35:complement(4449177..4469626)
Genome browser
AA seq
703 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCFYRRRDIPSNLIALAD
KHSKELEEEIEGESLQQLTERQIHQLKHRELFLSRQLESLPATHIRGKCCVTLLNETEAL
FSYLDKEDGFFYCLVYDPQQKTLLADKGEIQIGPRFQADITDLLKEGESDDRDQTELETK
IWDPESPLTDQQIDQFLVITRSVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDT
LHRCNYDMSCAITALVPQGGPVLCRDEMEEWSASEANLFEEALEKYGKDFADIRQDFLPW
KSLTSIVEYYYMWKITDRYVQQKRLKAAEAESRLKQVYIPNYNKPNPNQLDMNNVKTDLV
NGSGSQGQNSSDGQACESCYSTQCSQWYSWGPPSMQCRLCSNCWNYWKKYGGLKMSTRLE
GERLGPSRNSMSPFGYWVKNANPKYTLKTKQAFYLQTTTLTRIARQLCLALLQPRRAARR
PFVPVNSAEIKAQRSAMLPDEAKQLVKMRPMVRKPLETIVKYMELHPYVKPVKSTVSLIS
HKGSASVAKVTPVISLGSTTILGKRSYEQHNGAEGHCLGNMKKRLLMPSRGLPNHSQGLQ
LASLDKSYLLNGKPYERPQRIIKHGSLPPLKDRRMNWIDAPDDVFFMATEDTRKVCKLLA
SFDVKRAARQPYKQIFIKHVESELDVPAQLRHPANEEPIVIED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacatgtacagggtaggagattatgtttactttgagaactcttccagcaac
ccgtatttagtgagacgaatagaagagctgaataagactgcaaatggaaacgtggaagcc
aaagtggtctgtttctacaggagacgggatatccccagcaacctcattgcactggctgac
aaacactcaaaggagctggaagaggagattgaaggggagagtttgcagcagctgactgag
agacagatacatcagctgaagcacagagagctcttcctgtccaggcagctggagtcacta
ccagccacccacatacgcgggaaatgttgcgtcactctgctgaatgaaacagaagcactc
ttttcctacctagacaaggaggatggtttcttctactgcctggtctatgatcctcaacag
aagacactgttggcggacaagggcgagatccaaattgggccgcgattccaggccgatatc
acagacctcctgaaagaaggtgaaagcgacgatagggatcagacagaactggaaacaaag
atctgggacccggaaagtccattaactgatcagcagatagaccagttcctggttattaca
cgctctgttggtacctttgcccgtgcactagactgcagcagctccatcagacagcccagt
ctgcacatgagcgctgcggctgcatcaagagacatcaccctgttccatgctatggacacc
ctgcaccggtgcaactatgacatgtcatgcgcgatcaccgccctggtgcctcaggggggc
cctgtgctgtgccgggatgagatggaggagtggtccgcctccgaggcaaacctcttcgaa
gaggcgctggagaaatacggcaaggatttcgccgacattcgacaggactttctaccttgg
aaatccttaaccagtattgtagaatattactacatgtggaagatcactgacagatacgtg
caacagaaacgtttaaaagcggccgaagcagaaagcagactgaagcaagtttatatccca
aactacaataaacccaacccaaaccagctcgatatgaacaatgtgaagacagacctggtg
aatgggtcagggtctcagggccagaacagcagcgatggccaggcctgtgaaagctgttac
tctacccagtgctctcagtggtactcctggggtcctcccagcatgcaatgcaggttgtgt
tccaactgttggaattactggaagaagtacggtggcctgaagatgtcaacaagactggag
ggtgagaggctggggcccagtaggaacagcatgagcccctttggatactgggtaaagaac
gccaaccccaaatacacactgaaaaccaagcaggccttctacctccagactaccacgctg
accagaatcgcccgccagctgtgcctggccctcctgcagcctcgccgggcagctcggagg
ccctttgtacccgtcaacagcgcagagatcaaagcacagcgctcggcaatgctacctgac
gaagccaagcagttagtcaaaatgaggccgatggtgaggaagcccttggaaacgattgtg
aaatacatggagctgcacccctatgtcaagccggtcaaatctaccgtgagccttatttcc
cacaagggcagtgccagcgtggcaaaagtgaccccggtcatcagtctcggctccaccacc
atcctgggcaagcgcagctacgagcaacacaacggagctgaaggtcactgtctcggaaat
atgaagaaaaggctactgatgccatctagaggtttgccaaaccacagtcaagggctacag
cttgccagcctcgataagagttacctactcaatggaaaaccctatgagagaccccagcga
ataataaagcacggctctctaccgccactcaaggaccggagaatgaactggatcgacgct
cccgacgacgttttcttcatggccactgaagacaccagaaaagtctgcaaactcctggct
tccttcgatgtgaagagagcagccagacagccttacaaacaaatcttcatcaagcacgtt
gaatccgagctggacgtcccagcacagcttcgacacccagccaacgaggagcccattgtc
atcgaagactaa
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