Polyodon spathula (Mississippi paddlefish): 121304029
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Entry
121304029 CDS
T07273
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121304029 (robo4)
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
ROBO family
121304029 (robo4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_5
C2-set_3
Pur_ac_phosph_N
RskA_C
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
121304029
NCBI-ProteinID:
XP_041090906
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Position
36:2893905..2911013
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AA seq
1096 aa
AA seq
DB search
MMHRVLLLSTLWFCTWADGSRQCHCQCTCSPELAPSRDPRGPGREHTGQRPPRFPHLRQR
AHGKKGSWLRLDEFPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNR
PGGQSTAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFR
AQPSDVEVAVGEPVVMNCTPPKGHPEPNITWKKDGELINRTQERYNILSGRLIIANAQKN
DSGVYVCLAWNIVGERESRAGRLSVLEKPVFARKPDDATVKVGGSVQFRCEARGDPMPAV
HWSKEQGQLPSGRYEVSPDQTLRIHYITALDSGRYTCTATNQVGSTSVSASLAVQEVLDT
GQRDLHKELSVLRVHLENITVHPLLSNTVHILWKVQSEPHHLSGFEVLYRSLMPASSDWT
ERKFPVQRSAVIGPLKRGYKYEFKVRPFAGGLYGQESNTKHLRIPEQVPSAPPLGVAVTM
SSENNGTVLVSWEPPPHEAHNGIIQSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDSDT
QYWISVAAINGAGVGQLSEPHLLFMEPTMEAAAPPPLDTGPLDQVLRVLRGPVFIGSAGA
LLWLALMVTAVCLYRRHGRQARLKHAHHTSASLYRMASEDLIIRHRMAAPDSPWSSSAWK
SAPCSERYPGLWAQSKENPGFRKTTLPKNKKDPCPPDTAVPIVPDNCGLYGTFYVDLSGV
GLRTFSSPTRSPKVPHPGAKTPDVARFSQPVFKSSTNGEGQRLPWKQALPAQPNMGVLKE
SWEKNYKRELHAVNSAPLVPTWQCSELLKSAPRASVARVCHIAKGGLPVGSKSASSPKIL
HYSASLRMIDVLPAPPPFPELEDDTQSLSSEEDSSKSTKLTVEGGSVLLGGAAPGPQELP
ARDDPSYLTLSYSRLSTASFSLSLDEQNDGPLTAEEVEQYLELRHEAEDCSSLLSVSPPS
LPHPFSPTPTFGYICGPMPCDLDAEDLADDLAVPGSRQLRPRGGTLRRCPTSSPCCSEWE
GSMWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSGRRGVHT
GRGVISLCEDTLEKRK
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacagggtgttgcttctttccactttgtggttttgcacttgggcagatggatcc
agacagtgtcattgtcagtgcacctgctcgccagaactggcaccgtccagggaccccagg
ggcccgggtagggaacacactgggcagcgcccaccccgtttcccccacttgaggcagcgg
gcccacgggaagaagggctcctggctgcgtttggacgagttcccccctcgcattgtgcac
cacccctctgatctcgtggtgaaggctgacagcccagcctcgctctcctgccgtgcagag
gggaacccgccccctgttatagagtggcatcgcaatggggcacctctggagacaaacagg
cctgggggccaatcgacggcaatcgtgcttcccgatggcaacctcttcttcctgcgcgtg
gttcccgggagacggggccattccgacgagggcgtctacacctgcatcgcccgcaacagc
ctgggcaaagccaccagcaacgccacgctctacatcgcagctctgcgggaagagttccgt
gctcagcccagcgatgtggaggtggctgtgggggagccagtcgtcatgaactgcaccccg
cccaaagggcaccctgagcccaacatcacctggaagaaagacggggagctcatcaacaga
acccaggagcgctacaacatcctgagcgggcggctcattattgcgaatgctcagaagaat
gactctggagtctatgtctgcttggcgtggaatattgtaggagagagagagagcagggca
gggcgtctgtctgtgctggagaaaccagtgtttgcccggaagccagatgatgccacggtg
aaggttggcggctcggtgcagtttaggtgtgaggcacgaggggaccccatgccagctgtg
cactggagcaaggagcagggacagcttccctctgggaggtacgaagtgagtccagatcag
accctgcggatacactacatcacagccctggactctgggcgctacacctgtacagctacc
aatcaagtgggctccacctctgtgagtgcctccctggctgttcaggaggtcttggatact
gggcagagggacctgcacaaagagctgtctgtgctgcgcgtccacctggagaacatcact
gtgcatcctctcctatccaacacagttcacatactgtggaaagtgcagtcagagccccac
cacctgtccggctttgaggtgctgtaccgctccctcatgcccgctagctctgattggaca
gagaggaagtttcctgtgcagcgcagcgctgtgattggcccactgaagagggggtacaag
tacgagttcaaggtgcgcccgttcgctggaggtctgtacgggcaggagagcaacactaaa
cacctgcgcatcccagagcaagtccccagcgctccaccactgggtgtggcagtgacgatg
tcctcagagaataatggtacagtcctggtgagctgggaacctccccctcatgaggcacac
aatggaatcattcagagttaccaggtgtggtgtgtgcgttcagggggacagctgtcctct
aactggacagtggacagcgggactcatagcctggagatcacagcactggactctgacaca
cagtactggatcagcgtggcagccatcaacggagcaggagtggggcagctgagcgagccc
cacctcctcttcatggagcccaccatggaggctgctgcccccccacccctcgacacaggc
cccctggatcaggttctgagggttctgaggggccctgtgtttatcggcagcgctggcgcc
ctcttgtggctggctctcatggtcacggcggtgtgtctgtaccgacgacacggccggcaa
gcccggctcaaacacgcccaccacacgtcagcaagtttgtacagaatggcaagtgaagac
ctcataatcagacacaggatggcagctcctgactccccttggagctccagcgcctggaag
tcagccccctgcagcgaacgctatcccggactgtgggcccagagcaaggagaaccccggc
ttcaggaagaccactttgccgaagaacaagaaggacccctgccctccagacacagccgtc
cccattgtgcctgataactgcggtctctacggtaccttttatgtggacctctcaggggtg
ggactgaggacctttagcagcccgactcgcagcccaaaggtcccgcatcccggtgccaag
actcccgatgttgctcgcttctctcagcctgtctttaaaagcagcaccaacggggagggg
cagcggctaccgtggaaacaggcactgcctgcccagcccaacatgggtgtgctcaaggaa
tcttgggagaaaaactacaaaagagagctgcatgctgtgaacagcgctcccttggtgcca
acgtggcaatgttctgagctgctgaagagtgcccctagagccagtgtggccagagtgtgc
cacatagctaaaggtggtttgcctgtgggttcgaagtcagccagctcacccaagatcctg
cactactctgcttctctgcggatgattgatgtgctgccagccccgccccctttccctgag
ctcgaggatgacacccagagcctgagctctgaggaggactccagtaagtccactaagctg
actgtggaaggaggctctgtgctgctggggggagctgctccaggaccccaggagcttcct
gccagggatgacccctcttacctcaccctgtcttacagccgtctctccactgcgtccttc
tccctctccctcgatgagcagaacgacggccccctgactgctgaagaggtggagcagtac
ctggagctgagacatgaagctgaggactgcagcagtcttctgtcagtcagtcctccctcg
ctgccacacccattctccccgacccccaccttcggatacatctgcggcccgatgccctgt
gacctggacgcggaagaccttgctgacgacctggccgtgccggggtcacggcagctccgc
ccacgtgggggcaccctccgtcgctgtcccacctcctcgccctgctgcagcgaatgggag
ggctcaatgtggaacggctggggctcgatctcggaggggaacgcccccagcgcccgcgcc
agcctgatcagctcctccgacggatccttcatgaacgacgccaacttcgccagagtgctc
gccgttgccgcggaaacactggggggaggagccttctcaggtaggaggggagtgcataca
ggaagaggcgtaatatctttgtgtgaagatacactggagaaacgaaagtaa
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