Polyodon spathula (Mississippi paddlefish): 121304041
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Entry
121304041 CDS
T07273
Symbol
bud13
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121304041 (bud13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121304041 (bud13)
Spliceosome [BR:
pspa03041
]
Complex B
Other components
RES complex
121304041 (bud13)
Complex C
121304041 (bud13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
121304041
NCBI-ProteinID:
XP_041090927
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All DBs
Position
36:1423047..1431403
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AA seq
627 aa
AA seq
DB search
MAASSPVRATATLSKAEYLKRYLSGDAESKKTREKKLRKKRPKPSGKGMRIVDDDVDWKQ
FIQSEEKDKQDEEEEEEAPVVAEVIDERPDEVKRLEEFTNSNKWKTVGDRNEDSQDSEHS
HVSHLTASSGAASQKRTEDVSRRGRHDSPDLSASRKGRHDSPDLSASRKGRHDSPDLSPA
RKGRHDSPDLSASRKGRHDSPDLSPARKGRHDSPDLSPARKGRHDSPDLSPARKGRHDSP
DLSAPRRKPASAAEKSRRRRDSPSSSPSRRRRHDSSDLSPPRNSRQDSDSDLSPPRKKQS
VKRDASPHRRKHKAVPSTQQRHDSDSDVSPPRRKARGSDSDLSPQRRRPQQGGRRGSDSD
LSPPRRRPQQGGRRGSDSDLSPPRRRPQQGGRRGSDSDLSPPRRNARTSSDMSPPRRGNG
VQGANQMLSGGAAGLVSVEVLRKEHEENRKRERQNKPLEEASRNAQTVFRDKSGKKRDIE
LERIEKQKAAGEKAEKDEKYAQWGKGLVQGGMQQRNVEDAVLEAQKPLARHIDDEDLDKL
LREQERDGDPMAGLLRKKKEKEGQKKGVKERPRYKGPAPPPNRFNIMPGYRWDGVNRSNG
FEKQRYSRMADKKAGQEVAYKWSVEDM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccagtccagtaagggcgacagcgactctttccaaagcagagtacctgaaa
cgctacctctctggagacgcggagtccaaaaaaacaagagagaagaaactcaggaaaaag
agacctaaaccgagcggcaaagggatgagaatcgtcgatgatgacgtggactggaaacag
ttcattcagagcgaggagaaagacaagcaggatgaagaggaggaggaggaagctcctgtg
gtggctgaagttattgacgagcgaccagatgaggtgaagaggctggaggagttcacaaac
agtaataagtggaagacggtgggagatcgaaatgaagattctcaggattccgaacattcc
cacgtttcgcatttaacagcaagctcaggtgctgcctctcaaaagagaacagaggacgta
tccaggagaggccggcatgactcccctgacctctcggcttccaggaaaggccggcacgac
tcccctgacctctcggcttccaggaaaggccggcacgactcccctgacctctcacctgcc
aggaaaggccggcacgactcccctgacctctcagcttccaggaaaggccggcacgactcc
cctgacctctcacctgccaggaaaggccggcacgactcccctgacctctcacctgcgagg
aaaggtcggcacgactcccctgacctctcacctgcgaggaaaggacggcacgattctcct
gacctctcagccccgagacggaaacctgcctcggctgcagagaagtctcgcaggcgtcgc
gattcgccgtcctcttctccctcacgcaggagacgacacgactcctcagatctctcccct
cccaggaacagccggcaagattctgactctgacctctccccgcctcgcaagaagcagagc
gtaaaaagagatgcctcccctcacagaaggaaacacaaagcagttccttcaacacagcag
cgccacgactccgattcagacgtctcccctcccagacggaaagctcggggttctgattct
gacctgtcaccgcaaaggcgacgcccccagcagggagggaggcggggctccgactctgac
ctgtcaccgccaaggcgacggccccagcagggagggaggcggggctccgactctgacctg
tcgccgccaaggcgacggccccagcagggagggaggcggggctccgactctgacctgtca
ccacccagacgaaatgctcggacatcctcagacatgtctcccccacgcagaggaaacgga
gtccaaggagctaatcagatgctgtctggaggggcagcggggctggtctcagtggaggtc
ctgaggaaggagcacgaggagaatcggaaacgtgagaggcagaacaagcccctggaagag
gcatcccggaatgctcaaacagttttccgagacaagtctgggaagaagcgggatatcgag
ctggagcggattgaaaagcagaaggcagcgggcgagaaagcagagaaggatgagaaatac
gcacagtgggggaaagggctggtgcaggggggtatgcagcagcgcaacgtggaggatgct
gtgctggaggctcagaagccactggcgagacacatcgacgatgaagacctggacaagctg
ctgagagagcaggagagggacggggaccccatggcagggctgctgcgcaagaagaaggag
aaagaagggcagaagaaaggcgtcaaagagagaccgaggtataagggaccagcgccgcct
ccgaacaggtttaacatcatgcctggataccgctgggacggagtcaacaggtctaacggt
tttgagaagcagaggtacagcagaatggcagataagaaagccggacaggaagtggcctat
aagtggagtgtggaggatatgtaa
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