Polyodon spathula (Mississippi paddlefish): 121304067
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Entry
121304067 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121304067
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121304067
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121304067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
TFIIA
Zn_SUZ12
Dicty_REP
ATG14
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121304067
NCBI-ProteinID:
XP_041090975
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Position
2:94135352..94187334
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AA seq
382 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSAGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQ
QAQAARQQLESARNATRRTNTSNVTTTVAQSTATTNTITTENNQQTTHNSQFLLSRLNDP
KISEVERQSLESERADRSLFVQELLLSTLMREESSSSDEDERGEFADFGAMGCVDIMPLD
VALENLNLKECNKGNEPPPPPL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgaaggtgtcagctgcgatgcatgtttaaaaggaaacttccgaggtcgc
agatacaagtgtttaatttgctatgactacgacctgtgcgcatcttgttatgaaagtgga
gccaccacaacgagacacacaacggagcatccaatgcagtgtatattaacaagggtagat
tttgatttgtattatggcggagaagctttttcagtagaacagccgcagtcttttacttgt
ccttactgtgggaaaatgggttatacggagacatcgctacaagaacacgttacttcagaa
catgcagaaacatccacagaagtgatatgtccaatatgtgcagcgttaccaggaggagat
cccaatcatgtcacagatgactttgcagctcatcttacacttgaacacagagctcccaga
gatttagatgaatccagtggtgttcggcacgtacgtaggatgtttcaccctggtcggggt
ttgggaggtcctcgcgcacgtagatcaaacatgcactttactagcagttcagctggtggg
ctctcatcttcacagagttcatcatattctccaagcaatagggaagccatggatcctata
gctgagcttttatctcagttgtcaggagtgagacgctcagcgggtggacagctgaattct
tccggcccatcggcctcccagttacagcaactgcagatgcagctgcagctggaaaggcaa
caggcgcaggcagcgcggcaacagttggagtcggcacgcaatgcaacgagacgcaccaac
acaagcaacgtcaccaccaccgtcgcacaatcgacagcaacgacaaacacaatcaccaca
gaaaacaatcagcagactacccacaattcacagttcctcctttcacggttgaacgatcct
aagatatctgaagtagaacgccaatccttggaaagcgagcgggcagaccgaagcctcttt
gtccaagagcttctcctctccaccttgatgcgggaagaaagttcttcctcagacgaggac
gaaaggggggaatttgcagattttggtgctatgggctgtgtagatattatgcctttagat
gttgctttagaaaacctaaatttaaaagagtgtaataaaggaaatgagcctccgccacct
cctctttga
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