Polyodon spathula (Mississippi paddlefish): 121304088
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Entry
121304088 CDS
T07273
Symbol
zbtb16a
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121304088 (zbtb16a)
04121 Ubiquitin system [BR:
pspa04121
]
121304088 (zbtb16a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121304088 (zbtb16a)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121304088 (zbtb16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_11
MIX
zf-C2H2_2
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
121304088
NCBI-ProteinID:
XP_041090995
LinkDB
All DBs
Position
36:complement(4116557..4200665)
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AA seq
651 aa
AA seq
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MDLTKMGMIQLQNPNHPTALLLKANQMRLAGTLCDVVIMVDNQEFHGHRTVLACTSKMFE
ILFHRSSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQASDENDTEVNMNEGGAEDDEDRKARYIKNMSKKHSTEEGGYANAAQQGLATGTM
VDQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQSSFQQAQVKTEIMQVDEVSGQESPV
TSESTSSSGDKSGDSDKNKDGPGTPTRSSVITSARELHYVREESVSDQQGEVGQAGLESL
ASLHEKHLASLYSLPPNHKTETLLSVPASMASALHMQPALAMSMDFTAYGGLLPQSFIQR
EFFNKLGELAAGMKPDHRSQNERCNVCGAELPDNDAVEQHRKLHSGMKTYGCELCGKRFL
DSLRLRMHLLSHSAGAKPFACDQCGAQFSQEDALEAHRQTHTGSDMAIFCLLCGKRFQTQ
PALQQHMEVHAGVRSYICSECDRTFPSHTALKRHLRSHTGDHPFECEFCGSCFRDESTLK
GHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLR
THNGASPYQCTICLEYCPSLSAMQKHMKGHKPEDVPPDWRIEKTYLYLCYV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaagatgggtatgatccaactgcagaaccccaaccaccccacagcgctc
ctgctgaaggccaaccagatgcgcctggcagggacgctgtgtgacgtggtcatcatggtg
gacaaccaggagttccacggccaccgaacagtgttggcatgcactagtaagatgttcgag
atcctgtttcacagaagcagccagcattacactttggactttctctcaccaaagacgttc
cagcagattttggagtatgcctacactgcgacactccaagctaaagtggaagacttggat
gacctgctgtacgcagcagagattttagagatagaatacttagaagaacaatgcctgaag
atcctggaaaccatccaggcttcggacgagaatgatactgaagtcaacatgaacgaaggt
ggcgctgaggacgacgaagaccgcaaggccaggtacatcaagaacatgtcaaagaagcat
tccacggaggaagggggttacgccaatgcagcccaacaggggctggccacaggtacaatg
gtagatcaaagtccttctgtttcaacgtcatttggactttccaccatgagccccacgaag
gctgcggtagatagcctcatgagcatcgggcagtctcttctacaaagctcttttcaacag
gctcaagtgaagacagagataatgcaagtggacgaagtgtctggccaggaaagcccggtg
acgtccgaatccacttcttccagtggggacaagagtggcgattcggataaaaacaaggac
ggccctggaacacctacccgcagcagcgtgatcacaagcgcccgcgaactgcactacgtt
cgtgaagagagcgtgagcgatcagcagggcgaggtgggccaagcggggctggaaagcctg
gcttctctgcacgagaagcacctcgcttctctgtactctctgccgcccaaccataaaact
gaaacgctgctgtctgtgccggcttccatggcgtctgccctccacatgcagccagccctc
gccatgtccatggacttcactgcttacggggggcttttgccccagagcttcattcagagg
gagttctttaacaagctgggggagcttgcggcagggatgaagccggatcacaggagccag
aatgagcgctgcaatgtgtgcggagcggagctgccagataatgatgccgtggagcaacac
aggaagctgcacagtggaatgaagacctatgggtgtgagctgtgtggaaagagattcctg
gacagtttgcgtctaaggatgcacctgctgtctcattcagccggtgcgaagcccttcgcc
tgtgatcagtgtggagcacagttctcacaagaagatgctttggaggcccacagacaaaca
catacagggtctgatatggccatcttctgcctgctgtgtggcaagcgcttccagacacag
cccgccttgcagcagcacatggaggtgcacgcaggggtgaggagctacatctgcagcgag
tgcgaccggaccttccccagccacaccgccctgaagcgtcatctccgctcccatacaggc
gaccacccgttcgagtgcgagttctgcgggagctgcttccgggacgagagcaccctgaag
ggacacaagcgcattcacaccggagagaaaccctatgagtgcaacggctgtggcaagaaa
ttcagcctcaaacaccagctggagactcactaccgtgtgcacacaggagagaaaccgttc
gagtgcaaactgtgccatcagcgttcccgcgactactccgctatgataaagcacctgcgc
acccacaacggagcctccccttaccagtgcaccatctgcctggagtactgccccagcctc
tccgccatgcagaagcacatgaagggacacaaacctgaggatgtgcccccagactggagg
atagagaagacctacctgtatctgtgctatgtctga
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