Polyodon spathula (Mississippi paddlefish): 121304191
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Entry
121304191 CDS
T07273
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121304191 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121304191 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121304191 (vars1)
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121304191 (vars1)
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121304191 (vars1)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121304191 (vars1)
Prokaryotic type
121304191 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
Anticodon_1
tRNA-synt_1e
GST_C_7
Motif
Other DBs
NCBI-GeneID:
121304191
NCBI-ProteinID:
XP_041091094
LinkDB
All DBs
Position
37:5223200..>5239581
Genome browser
AA seq
1023 aa
AA seq
DB search
MSTLYVSPHADDFRSQTALVAAEFTPPSSRPRVQTGGGTSPATPHPSLVTGGGLVLAGAT
SVSYFLCPEEMAGSGQRDSALVRQWVSFAENEVTPAACALTFPLLGMLDPNKQVTERAQT
ELKKVLTMLDSFLKLRTFLVGESLTLADITVACSLLLPFKYVLEPAVRKPFVNVSRWFVT
CVNQPQFKKVLGDVKLCEKVGQVNPKTSSPQSGEQVPKVPGQEATVAPRPKTEAQLKKEA
KKKEKMEKFQQKKEIEQKKQQSQTEKKAKPEKKEKKELGVITYDLPTPAGEKKDVQCAMP
DSYSPQYVEAAWYPWWEKQCFFKPEYGRKDLSEPNPKGVFMMCIPPPNVTGSLHLGHALT
NAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQKKNRHDLGRDAFVKEVW
NWKNQKGDRIYHQLKKLGSSLDWDRACFTMDTKLSYAVQEAFVQLHEEGVIYRSKRLVNW
SCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFAYKIEGSDEEVIVATTRIE
TMLGDTAVAVHPQDARYQHLKGKTVVHPFCDRKLPVVFDEFVDVNFGTGAVKITPAHDHN
DWEVGQRHDLEFINIIDENGFLINVPPPFLGMKRFDARKAVLEALKQRGQFREVKDNPMV
VPVCSRSKDVVEPLLKPQWYVSCEEMGRQAAEAVRSGELKIIPETHLKTWFNWMDNIRDW
CISRQLWWGHRIPAYFVTVDDPSVPPGEDIDGKYWISGRSEEEAREKAAKVFGVPAEKIS
LRQDEDVLDTWFSSGIFPFSIFGWPNQTQDLSVFYPGTLLETGHDILFFWVARMVMLGLR
LTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISIEGLHAQLVDSNLDPVEI
EKAKEGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
AIRVLGEDFKPVAKAQLCGSESLADRWILSRLSLAVELCDSGFRSYDFPAITTAIYSFWL
YEL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtccactctctacgtctctcctcacgcggatgacttccgcagtcagaccgccctcgta
gctgctgagttcacgcccccttcatccagaccccgggtccagacagggggcggaacctcg
ccggccacgccccatccctctctggtgacaggtggggggctggtcctagcgggcgcgacg
tccgtgagctacttcctgtgtccggaggagatggccggtagtgggcagcgggactccgct
ctggtcaggcagtgggtcagttttgcggagaatgaggtcactccggctgcttgtgccttg
accttccctttgctgggaatgcttgatcccaacaaacaggttacagagcgtgctcagaca
gagctgaagaaggttttgactatgctggactctttcctcaaactcaggactttcctggtt
ggggagagcttgaccttggctgacatcacagtggcctgttccctgctcctgcctttcaaa
tacgtgttggagcccgctgttcggaagccctttgtcaacgtgtcgcgctggtttgtgaca
tgtgtcaatcagccgcagttcaagaaggtgctgggagacgtgaagctgtgtgagaaggtg
gggcaggtcaacccaaaaaccagcagcccgcaatctggagaacaggtacccaaagtccca
gggcaggaggccaccgtcgccccacgaccgaaaaccgaagcccagctgaagaaagaagcc
aagaagaaggagaagatggagaagtttcaacagaagaaagagatagagcaaaagaaacag
cagtcccagactgagaaaaaagccaaacctgagaaaaaagaaaagaaggaactaggggtc
ataacgtatgacctcccaactccagctggagagaagaaagatgtgcaatgtgcaatgcca
gactcctacagcccccagtatgtagaggcagcttggtacccctggtgggagaaacagtgc
ttcttcaaacctgagtatgggcggaaggatctctctgagccgaaccccaagggtgtgttt
atgatgtgtatccctccgcccaacgtgaccggatctcttcaccttggccacgccctcaca
aacgccatccaggattctctaactcgctggcaccggatgcggggagaaaccaccctgtgg
aaccctggctgtgaccatgctggtattgccactcaggtggtggtggagaagaagctctgg
agagagcagaagaaaaacagacacgacctgggcagagacgccttcgtaaaggaggtgtgg
aactggaagaaccagaaaggagatcgaatttaccaccagttaaaaaaactgggatcctct
ctagactgggaccgggcctgttttaccatggatactaaattgtcctacgcagtgcaggaa
gcgtttgttcaattgcacgaggaaggggtgatctaccggagcaagcgtctggtgaactgg
tcttgcactctcaactctgcgatctccgatatcgaggtagataagaaggagctgacaggt
cgcaccctcctccctgtcccggggtacaaagacaaggtggaattcggggttctcgtctcc
ttcgcatacaagatcgagggctctgatgaggaggtgattgtcgccaccactcgtattgag
acaatgctgggagatacagccgttgcagtccacccacaggatgcccgatatcagcacctc
aaggggaagactgttgttcacccattctgcgatcgcaaactgcctgttgtgtttgatgag
tttgtggatgtcaactttgggacaggtgctgtgaagatcaccccagctcatgatcacaat
gactgggaggtgggacagaggcatgatctggagttcatcaacataatagatgagaacggc
ttcctgatcaacgtgccccctccattcctggggatgaagcggtttgacgcccgcaaggct
gtgctggaggctctgaagcagcggggacagttcagggaggtgaaggacaacccaatggtg
gttcctgtgtgcagccgctccaaggacgtggtggagcccctgctcaagccccagtggtac
gtgagctgtgaggagatgggcaggcaggcagccgaggcagtgaggtcaggagagctcaag
atcatcccagagacacacctcaagacctggttcaactggatggacaacatcagggattgg
tgcatctccagacagctgtggtggggtcatcgcatcccagcatactttgtgactgtcgac
gatccctctgttcctcctggggaggacatagatggaaagtactggattagcggtcgcagc
gaggaagaggctcgcgagaaggcagcgaaagtgtttggagtcccagctgagaagatctcg
ctgagacaggatgaggatgtgctggacacctggttctcttcaggaatcttccctttctcc
atcttcggctggcccaatcagacccaggacctgagtgtgttctatcccgggacgctgctg
gagactgggcatgacatcctgtttttctgggtggccaggatggtaatgttgggtttgaga
ctgactggtaaactacccttcaaagaggtgtatctccatgcagttgtccgtgacgctcac
ggcagaaagatgagtaaatctctgggtaatgtcattgatcctctggacgtcatcactggc
atttccattgagggccttcacgctcagcttgttgacagtaatcttgacccagtggaaatt
gagaaagccaaagaaggacagaaatcggactaccccaatggaatcccggagtgtggaact
gatgccttgagatttgctctctgtgcttacaccagtcaaggccgtgacattaacctggat
gtgaaccggattctaggctacaggcacttctgcaacaagctgtggaacgcaaccaagttt
gcaatccgagttctcggagaagactttaaaccagtggccaaggctcagctgtgtggcagc
gagagtcttgctgatcgctggatcctgtctcgcctctctctcgcggtggagctctgcgac
tccggcttcaggagctacgacttcccggcaatcacaactgccatctacagcttctggttg
tacgaactg
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