Polyodon spathula (Mississippi paddlefish): 121304211
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Entry
121304211 CDS
T07273
Name
(RefSeq) kin of IRRE-like protein 1
KO
K25874
Kirrel/Neph family protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121304211
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Kirrel/Neph family
121304211
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GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C1-set
Ig_6
FAM176
B12D
Motif
Other DBs
NCBI-GeneID:
121304211
NCBI-ProteinID:
XP_041091138
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Position
37:987597..1002882
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AA seq
732 aa
AA seq
DB search
MRAFWIVLSLCLLEGGRAAYFSQEPQDQVVVSGQSVTLPCVIVGYRGMVQWTKDGLALGG
ERDLPGWTRYSIMGAPMSDEHSLLIDSAELADDAVYECQATQAALRSHRARLTVLVPPED
PTVDDGPVVRLKAHAPYNLTCRASGAKPAAEITWYREGKLQEAAVYSKSLMEDGKRELSS
SMLLVTPEDQDTGRAFTCHVSNPAAPAGKETSITLNVQHPPTVTLSVEPQTVLEGAKVLF
VCFASANPEITGYRWAKGGVLISEANGDSLEATVDHTYFTDPVSCEVSNSVGSTNVSTLV
DVQFGPKLMSEPKPQSVDVGMDAAFTCSWTGNPPLTLAWTKVGSNVVLSNGNTLQLKAVT
QVDAGSYACKAIVPRVGVAEQEVTLTVNGPPLITAEPLQHAAKGGNAKLECFVDSTPPPD
KIVWSFGETTLSGGSSGRFTVSTASVAGGVMSSLVITETMAHDFSVRYNCSAWNRFGEGV
ALLTLQEQEVLPLMIIVGAAVGGGAILLTCILVIILLCCRNSGKGKKSTRLSKSDIRVQI
VHSDHNVARTNEDEEEDVKEPMAPNSESPGTSRTEHSDLLEEEEDERAELKDPTNGYYNV
RSHEGLLIRSGFSDYLPNPRPIYTPSSQQASQPRIYDYRHRYGTATGGHTPCEQQYPQEP
VYGGSAYLPAPYRRAFTSYVKPATYEKVDSYDPCDQASKVSSSSRFSFASSQVSSQQSEF
GRPTHQRMQTHV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgttctggatcgtcctctccctgtgcctgttggaaggaggacgcgccgcgtac
ttctcgcaggagcctcaggaccaggtggtggtgagcggtcagtccgtgacactgccctgc
gtcatcgtgggataccgcggtatggtgcagtggaccaaggacgggctggcactgggagga
gagagggacctgccaggctggacccggtactccatcatgggagcgcccatgtcggacgag
cacagtctgctcattgactctgctgagctggcagatgacgctgtgtacgagtgccaggcc
acgcaggctgccctgcgctcccacagagccaggctcactgtgctggtaccccccgaggac
cccacggtggacgacgggccggtggtgaggctgaaagcacacgcgccctacaacctgacc
tgcagagcctcgggggcaaagccagccgcggagatcacatggtaccgggaggggaagctg
caggaggctgcggtctactccaagagtctgatggaagatggtaagcgggagctgtcgtcc
agcatgctcctggtcactcctgaggatcaggacacgggccgagcgttcacctgccacgtc
agcaaccctgccgccccggccggcaaggagacctccatcacgctcaacgtgcagcacccc
ccgaccgtcactctctctgttgagcctcagaccgtcctggaaggagccaaggttctcttc
gtctgctttgcttcggccaacccggagatcaccggctacaggtgggcaaaaggcggcgtg
ctcatctccgaggccaatggagacagcctggaggccacggtcgaccacacctacttcacc
gaccccgtgtcctgcgaggtgtccaactccgtgggcagcaccaacgtcagcaccctggtg
gatgtgcagttcggtccgaagctgatgtctgaacccaagccccagtctgtggatgtcgga
atggacgctgcctttacctgctcctggacagggaacccacctttgactttagcctggacc
aaagtgggctcaaatgtggtcctcagtaacgggaacactctgcagctgaaggcggtcact
caggtggatgctgggagctacgcctgcaaagccatcgtgccgcgcgtcggagtggctgag
caagaggtcaccctcacagtgaacggccccccactgatcacagcagagcccctccagcac
gcagccaaggggggcaatgcgaagcttgagtgtttcgttgacagcacgcccccgccagac
aagattgtctggtcgttcggtgagaccaccttgtcaggaggcagctcaggtcgcttcacg
gtcagcaccgcctcggtggccgggggagtgatgtcatcgctggtcatcacagagacgatg
gcgcatgacttcagcgttcgctacaactgcagcgcgtggaaccgcttcggagagggagtg
gccctgctaacactccaggagcaagaagtgctccccctaatgatcatagtgggcgctgca
gtcgggggcggagccattctcctgacctgcatcctcgtcatcatcctgctgtgctgcagg
aactctgggaaaggcaagaagagcacccgcctctccaagagtgacatccgagtgcagatc
gtgcacagcgaccacaacgtggcccggaccaatgaggacgaagaggaggacgtgaaggag
ccaatggctccaaacagcgaatctccaggaacttccaggacagagcacagtgacctgctg
gaggaagaggaggacgagcgggcagagctgaaggatcccaccaatggctactacaacgtg
cgcagccacgagggtcttctcatccgcagcggcttttcagactacctcccgaacccccgt
cccatctacaccccctcctcccagcaggccagccagcctcgcatctacgactacaggcac
cgctacgggaccgccactggggggcacaccccctgcgagcagcagtacccccaagagcct
gtgtacgggggctctgcctatctcccggcaccctacagacgagctttcaccagctacgtg
aagccagccacctacgagaaggtggactcttacgacccctgtgaccaggccagcaaggtg
tcgagctcgtcgcgcttctccttcgcatcctcgcaggtttcttcgcagcagtcagagttc
gggaggcccacgcaccagcgcatgcagacgcacgtgtga
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