Polyodon spathula (Mississippi paddlefish): 121304214
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Entry
121304214 CDS
T07273
Name
(RefSeq) basal cell adhesion molecule-like isoform X1
KO
K06578
Lutheran blood group glycoprotein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121304214
CD molecules [BR:
pspa04090
]
Proteins
121304214
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GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_4
C2-set_3
Izumo-Ig
C1-set
DUF3377
CD34_antigen
Insulin_TMD
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
121304214
NCBI-ProteinID:
XP_041091146
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Position
37:complement(1349904..1375868)
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AA seq
629 aa
AA seq
DB search
MEGKLARPVWVLLFAAAALQAGQAVVQVSVPREVDAELGKSVSIPCTYSSSSKTSNVIVE
WFITERGGDRQRVAYRSSSDSGTDKNTELSGRVSVDQDSSLSLSVVEIGDEQDYHCQITA
GPAGSGEGSAHLRVYSAPQTPEVSPQTKIISVTDLSVSEVSTCTSKNGNPAPKIIWYKDS
TPLPEVTESNDNMYMVPRVVKESSGLYTVTNTLYFKTSKEDKDSEFHCQVEYEMPGGRME
TKASPKFSLSLHYYTEEVTFAVVTPKKVKEGDDVILKCKADGFPEPEYELTKIQSDGSIV
EKGTFSGTFTLHSVTRDDGGKYRCEALDFDSPAEVKLKKEVTLLVHYLDPVTVSPSSSVS
VPLGGSLELGCTTTGSKTPSFMWKKGSQVVSQSTPLVLKEVSFEAAGSYSCVASVPGVSG
LVKEANTTVTVTGKVQIIDLPYSGRVSKEGELLTLSCTAQGHPEPQISWTPAGLEAISSV
TGNKVTSTVTLSVTPMLVDSGVTCEASNEHGSSSKKFKVTIYKETPTVTPPVDTEVAPIH
KTANRQEQGGSSAAVIAVVVCVLLLLILVGFLYFLQKKGKLPCGRQGKEDIVNTEANTDE
IVVEMKSGKPNEEAGLLDSNGRQRPMRDQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaaactcgctcgcccagtctgggtccttctgttcgcagcggcagccttgcaa
gccgggcaagccgtggtccaggtctctgttccccgtgaggtggatgcagagctggggaag
tccgtcagcatcccctgcacctactcctccagcagcaagacaagcaacgtgatcgtggag
tggttcatcacggagcgcgggggggacagacagcgcgttgcctatcgcagctcctcggac
tccggcacagataagaacacagagctgtcgggccgggtcagtgtggaccaggactcctct
ctctctctcagcgttgtggagattggggacgagcaagactatcactgccagatcactgcg
ggaccagcggggagcggagaggggagcgcacacctacgggtttactctgccccacagact
cctgaagtgagcccccaaaccaagatcatctcagtgactgacctttcagtgtcagaggtc
agcacttgcacaagcaagaatggaaaccccgccccaaaaatcatctggtacaaagactcc
accccccttcctgaggtcacagagagcaacgacaatatgtacatggtgcctcgtgtagtg
aaggaatcgtctggtctctacaccgtcaccaatacgctgtacttcaaaaccagcaaggag
gacaaagactcagagtttcactgccaggtggagtacgaaatgccagggggtaggatggaa
accaaggcctcccccaaattcagcctgtccctgcactattacacggaggaagtgaccttt
gccgtggtgaccccgaagaaggtgaaggaaggcgatgatgtcattctgaagtgcaaggca
gacggtttccctgaaccagagtacgagttaacaaagattcagtcggacggcagcattgtg
gaaaagggcaccttctccggaacgttcaccctccactcggtaacccgcgacgacgggggc
aagtaccgctgcgaggcgctggatttcgattcacccgcagaggtcaaactgaagaaggaa
gtcactctgttagtccactatctggacccggtcactgtgtctccctccagctccgtctcg
gttcctctagggggcagtttggagctgggctgcaccaccactggctcgaagacaccctct
ttcatgtggaagaagggctcccaggtggtctcccagtctactccgctagtcctgaaggag
gtctcgttcgaggcagcaggcagctacagctgtgtggccagcgtgcccggcgtctctgga
ctggtcaaggaggccaacaccaccgtcactgttactggaaaggtccagattattgacctg
ccttacagtggaagggtatcaaaagaaggggagctcctcactctgtcctgcacggctcag
ggtcaccccgaaccccaaatctcatggacccccgctggactggaggctatcagctcagtg
accgggaacaaagtgaccagcaccgtgaccctgtcagtgacccccatgctggtggatagc
ggggtcacctgcgaggccagcaacgagcacggctcaagcagcaagaagttcaaagtgacg
atctacaaagaaaccccaacagtcacacctcctgtagatactgaagtggcccccatacac
aagacagcgaatcgtcaggagcaggggggcagcagcgcggcggtcatcgcggtcgtggtc
tgtgtcctgttgctcctcattctcgtcggcttcctctacttccttcagaagaagggcaag
ctgccctgcggccggcaggggaaggaagacattgtgaacacagaggctaacacagacgag
atagtcgtggagatgaagtctggcaaacccaatgaggaggcggggcttctggactccaac
gggcgtcagcggccaatgcgagatcagtga
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