Polyodon spathula (Mississippi paddlefish): 121304227
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Entry
121304227 CDS
T07273
Name
(RefSeq) cell adhesion molecule 4-like isoform X1
KO
K06783
cell adhesion molecule 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121304227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121304227
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Nectin family
121304227
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Ortholog
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GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
C1-set
BAGE
DUF3681
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
121304227
NCBI-ProteinID:
XP_041091171
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All DBs
Position
37:801579..813292
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AA seq
403 aa
AA seq
DB search
MGLVEMDRGPVSRIVLGCWVVIACCCLAFSAQALQAENVTVTEGGRAEINCKLQSYDGSI
VVIQNPYRQTLFFNGTRALKDERFQMVQFTPRLVKIVLSDVRVEDEGGYFCQLYTDATLH
QVATLTVLVPPAEPQVEVKEQVVEGGVMELTCIAPRSKPPATLRWYRDRREIPGVTSQQD
NDKTVSVSNTIRLAVSKRDNGALVTCEATHPALRSQRKITQHALDVHYAPTVEIQHPPGV
MREGDSLSLDCIISANPMPHTVLWSRLNDSLPERTEIQGTLLSIPRLSALDNGTYVCEGR
NKYGRTADEYTLVVYDIHPVIEFKDPGAIVEAQRYLPYSIIGGILAVLVFGVITVLIVTV
WCSVNQKGSYLTHEASGLDEHGEVQEAFLNGSETREGKKEYLL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggactggtagagatggacagaggtcctgtctctcgtattgtactgggatgctgggtt
gtgattgcctgttgctgtctggcattttcggcccaggcgctgcaagcagagaacgtgacc
gtgacggagggcggccgggcggagatcaattgcaagctgcagagctatgacgggtccatc
gtggtcatccagaacccctacagacagacgctattcttcaacgggacccgagccctgaag
gacgagcgtttccagatggttcagttcactccgaggctggtgaagatcgttctgtctgat
gtcagggtggaggatgagggggggtacttctgccagctctacaccgatgccaccctccac
caggtggcgacgctcacagtgcttgtgccccctgcagagcctcaagtggaagtgaaggag
caggtggtggagggaggggtgatggagctgacctgcattgctcccagaagcaaacccccg
gccacactgcgctggtacagagaccgccgggagataccaggagtgaccagccagcaggac
aatgacaagacggtcagcgtgtccaacaccatccgcctggcggtcagcaagagggacaac
ggggccctcgtgacgtgcgaggcgacccatcctgccctgcgcagccagaggaagatcaca
cagcacgccctcgacgtgcactacgccccgacagtggagattcagcacccccccggagtg
atgagagaaggggacagcctgtcgctggactgtatcatctctgcaaacccaatgccccac
acggtgctgtggtcccggctcaacgactctctcccagagaggacagagatccaggggacc
ctgctcagcatcccccggctcagcgcgctggacaatgggacctacgtgtgcgagggacgc
aacaagtacgggcgcacagctgatgagtacacactggtggtgtacgacatccatcctgtc
attgaattcaaagacccgggtgcgattgtggaggcacagagataccttccctactccatc
attggaggcattctggccgtgctggtgttcggagtgatcactgtgctcattgtaaccgtc
tggtgctctgtcaatcaaaaaggttcatacctgacccacgaggcgagtggattggatgag
cacggagaggtgcaggaggctttcctgaacgggagcgagacccgggaggggaagaaggaa
tatttactgtaa
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