Polyodon spathula (Mississippi paddlefish): 121304243
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Entry
121304243 CDS
T07273
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121304243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121304243
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
121304243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
121304243
NCBI-ProteinID:
XP_041091201
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All DBs
Position
37:1886717..1891637
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AA seq
324 aa
AA seq
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MRPGFSPRGGGFGNRGRGGFGDRGGRGGFGDRGGRGGFGDRGGRGRGGFRGGSRGGFRSP
GGEGGFRGGRGTPRGGRGGRGGFRGGKRVTVEPHRHEGVFICRGKEDALVTKNMVVGDSV
YGEKRINVEEGETKIEYRAWNPFRSKLAAAILGGVDQIHIKPGARVMYLGAASGTTVSHV
SDIVGPEGLVYAVEFSHRSGRDLLNVAKKRTNIIPIIEDARHPHKYRMLVGMVDVIFADV
AQPDQTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMTQENMKPQEQL
TLEPYERDHAVVVGVYRPPPKQKK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaggattcagccctcgaggaggaggatttgggaacagaggccgcggtgggttc
ggagaccggggcggccgcggaggattcggagaccgagggggccgcggaggattcggagac
cgggggggccgcggccgaggaggatttcggggaggcagcagaggcgggttcaggtccccg
ggaggtgaaggaggatttcgggggggtcgcgggacgccccgtggaggaagagggggtcga
gggggcttcagaggaggaaagagggtcacggtggagccccacagacacgaaggagtcttc
atctgccgtgggaaggaagatgctttggtcactaagaacatggtggtgggggactctgtg
tacggagagaagaggatcaacgtggaggaaggagagacgaagattgagtacagagcgtgg
aacccgttccgttctaaactggcggccgcgatcctgggaggagtggatcagattcacatc
aaacccggggctcgggtcatgtacctcggagccgcctcgggaaccacggtgtcgcacgtc
tcggacatcgtaggaccggaggggctggtgtacgcagtggagttctctcacaggtctggc
agagacctcctcaacgtggccaagaagagaaccaacatcatccccatcattgaagatgcc
cgacacccacacaagtacaggatgctcgtgggcatggtggatgtgatcttcgcggacgtt
gctcagcctgaccagaccaggatcgtcgccctcaatgcgcacaacttcctgaagaacgga
ggccactttgtcatctccattaaggcgaactgtatcgactcgactgcagccccggaagca
gtgtttgcggctgaggtgaagaagatgactcaggagaatatgaagccccaggagcagctc
acgctggagccctacgagagggaccacgctgtggtcgtgggagtctacaggccaccaccc
aagcagaagaaatga
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integrated database retrieval system
