Polyodon spathula (Mississippi paddlefish): 121304300
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Entry
121304300 CDS
T07273
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121304300
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
121304300
NCBI-ProteinID:
XP_041091294
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Position
37:complement(3852708..3862048)
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AA seq
614 aa
AA seq
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MASSRAAMPAPVCLIENSSTGQLRVNQQALEILSQIDQPVVVVAIVGLYRTGKSYLMNKL
AGKRSGFSLGSTIQSHTKGIWMWCVPHPCKPGHTLVLLDTEGLGDVEKGDQKNDCWIFAL
AVLLSSTLVYNSRGTIDNNALENLQYVTELTDLIKVKSQDSASEEEDFDYVRYFPQFIWA
VRDFTLELKIEGVTVSADEYLEHALSLKKGFGKKVSDYNLPRECIRNYFPTRKCFVFVAP
TAGENMSRLETMEENELSGTFLQVTKQFCACIFTKSTVKTIKGGHKVTGRMLGSLVSTYV
DTITSGSVPCLDNAVLAMAQIENKAAVQEGFSVYQKGMEQSLQIPVERDTISEQHGKWEK
QALETFMKRSFKDDGQIHQITLAEHINSYYVELMKRNDAVSIKACNDLLVDLSGQMSHNL
QQGVYATSGGYKLYCKDRDHVVQQFRATPNKGTKAEDVLDQFLKQKKIEAASILLADQKL
TENEKQIANEREHAFQMEQQNKAMEEESRQMMRTLEDERRSNAENQRQLELKMQEERENA
RKEYESALESKLKEQEELIKKGFEDKARMLQEEISQFKEESKGWLPVAKTLLDTGVSALN
SYLQYKSITNLIKK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagtagagcggcaatgccagcccctgtgtgtctgatagagaacagctccact
ggacagcttcgtgtgaaccagcaggcgctggagatcctgtcccagattgaccagccggtg
gtggtggtggctatcgtgggcttgtatcgcacaggcaaatcctacctcatgaacaagctg
gctgggaagagatcgggattctccctggggtcgaccatacagtcccacactaaaggcatc
tggatgtggtgtgtccctcacccgtgtaaacccggccacaccctcgtgctgctcgatacg
gaggggctgggagatgtggagaagggagaccagaagaatgactgctggatcttcgctctg
gctgtcctgttgagtagcaccctggtttacaacagtcgtggcacaatcgacaacaatgct
cttgaaaacctgcagtatgtgacggagctaactgacttgatcaaggtgaagtctcaggac
agtgccagcgaggaagaggactttgactacgtgcgctatttccctcagtttatctgggct
gtgcgtgatttcaccctggagctgaagatcgagggagtcactgtatcagcggatgagtat
ctggagcatgctctctccctcaagaaaggctttggcaagaaggtatcagattacaacctc
ccacgagagtgcattcgcaactacttccccacgcggaagtgctttgtgtttgtagcgccg
acagcaggagagaacatgagccgcctcgagacaatggaggagaatgagctgagtggcaca
ttcttgcaggtcaccaaacagttctgtgcatgcatcttcacaaagtctactgtcaagacc
atcaagggagggcacaaagtcaccgggagaatgctgggtagcctggtcagcacctatgtg
gacaccatcacaagcggttcggtgccctgcttggataatgcagtgcttgccatggctcag
attgagaacaaagctgccgtgcaggaggggttttctgtgtaccagaaggggatggagcag
tcactgcagatcccagtggagagggacacgatttctgagcagcatggaaagtgggagaaa
caagccctggagaccttcatgaagcggtccttcaaggacgatggacaaatacaccaaata
actctagcggaacacattaacagttactatgttgagcttatgaagcgcaatgatgccgtc
tccataaaagcatgcaacgacctgcttgtggatctgtcaggccagatgagtcacaatctg
cagcaaggagtttacgcaacatcaggaggctacaagctgtactgcaaggaccgtgaccat
gtggtgcaacaattcagagccacgcccaacaagggaacgaaggcagaggacgttctggat
caatttctaaaacagaagaaaatcgaagctgcctccattctgctggctgatcaaaaactc
acagaaaatgagaagcaaatagccaacgagcgggaacatgcattccaaatggagcagcag
aacaaagcaatggaggaggaaagccgtcagatgatgcgcaccttggaggatgagcggagg
agcaatgctgagaaccagcggcaattggagctgaagatgcaggaagagagagagaacgcc
cgcaaggagtacgagagcgcgctggagagcaagctgaaagagcaggaggagctgataaag
aagggctttgaggataaagcaaggatgctgcaggaggagatcagccagttcaaagaagag
tcaaagggctggttacctgtagctaagacacttcttgacacaggtgtgagtgcacttaat
tcttacttacagtacaaatctataacgaatttaataaaaaaatag
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