Polyodon spathula (Mississippi paddlefish): 121304331
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Entry
121304331 CDS
T07273
Name
(RefSeq) vesicle-trafficking protein SEC22b-like
KO
K08517
vesicle transport protein SEC22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121304331
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121304331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121304331
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121304331
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
DUF932
DUF5617
Imm70
Motif
Other DBs
NCBI-GeneID:
121304331
NCBI-ProteinID:
XP_041091339
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Position
37:3659811..3663792
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AA seq
216 aa
AA seq
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MTTLTMIARIQDGMLLAASMQESEQSGRNLQEYQNQAKQLFRKLNENSPPRCSLETGPMV
FHLLLSQGVCYLVLCDGSYSKRMAFSYLEELQAEFSELYGKRLASVSRPYAFIEFDTFIQ
KLKKNYQDSWSRRHLSSVNTELQDVQRIMVTNIEEVLQRGEALSALDSKASNLSALSKKY
RQDAKYLNTRSLYAKLGAASAVCMIIFLYARFWWLV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgactactctcacaatgatagcacgaatccaggacggcatgctgctcgctgcctccatg
caggagagcgaacagtcgggtcggaacctgcaggagtatcagaaccaggccaagcagctc
ttcaggaagctgaacgagaactctcccccccgctgctcgctggagaccgggccaatggtg
ttccacctcctcctctctcagggggtgtgttacctggtgctgtgtgatggctcctactcg
aagaggatggcattctcgtacctggaggagctgcaggctgagttcagtgagttgtacggc
aagaggctggcatctgtgtcgaggccgtacgcgttcatagagttcgacacgttcattcag
aagctgaagaagaactaccaggactcgtggtctcggcggcacctgagctcggtgaacaca
gagctgcaggacgtgcagaggatcatggtgaccaacattgaggaggtgctgcagagagga
gaggcactgtcagcgctggactcaaaagccagtaacctgtctgccctgtcgaagaagtac
aggcaggacgccaaatacctgaacactcgctctctgtatgccaagctaggagcggcgagc
gcggtgtgcatgatcatattcctctacgcacgcttctggtggctggtctga
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