Polyodon spathula (Mississippi paddlefish): 121304345
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Entry
121304345 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1-like isoform X1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121304345
04082 Neuroactive ligand signaling
121304345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121304345
G protein-coupled receptors [BR:
pspa04030
]
Metabotropic glutamate receptor family
GABA
121304345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
Kei1
UPF0242
DUF6377
NEMP
TssN
DUF3995
Amelin
TMF_TATA_bd
Pox_P21
Motif
Other DBs
NCBI-GeneID:
121304345
NCBI-ProteinID:
XP_041091364
LinkDB
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Position
37:complement(2754146..2800771)
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AA seq
992 aa
AA seq
DB search
MDITMLLPLLLTLQSTGATLRNVSTAGCHIIKPPRDGGIRYRGLTQEQIRRVQILPVDYE
IEYVCRGERIISGPKVRKCLENGRWTDMSKESRCLHPCPRVWLSLENGQVQSDLSELDRS
PVEGTQLSYHCDPGFRLLGANTSTCTKTGKWDNAKPVCQYDRHYTGQARSGKKTLYIGAL
FPMSGGWPGGQACLPSAEMALEHVNRRADILPDYELKLIHHDSKCDPGEATKLLYELLYK
DPIKIVLMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNP
TRVQLFKKWNWSKIATIQQTTEVFTSTLDDLEDRVKKAGIELSVRQSFLSDPAVAVKNLK
RQDARIIVGLFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKINDPSINCTVENM
TEAVEGHVTTEIVMLNPEIVRGVSDLTSEDFLDKMMARLGVMNPEETGGFQEAPLAYDAV
WALALALNKTAGELAKRGLRLEDFNYNNKNITGEIYKAMNTSSFMGVSGHVVFDAQGSRM
ALTLIEQLQGGIYKKIGYFDSSKGNLTWYGNDKWIGGSPPADRTELIVEYRFLSQKLFVS
VAVFAGFGILFGIICLTFNIYNSSVRYIQNSQPYLNNMTAVGCVLALAAVFPLGLDRKHI
AQGHFPFICQARLWLLGLGFSLAYGSMFTKIWWVHTVFTKKDEKKDKRKQHLEPWKLYAT
VGVLLAIDILSLMIWQIVDPLHITVEEFIKEAPKGDLDVLVQPLLEHCNSEKMNTWLGVV
YGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCMITAPVTMILNSQQDAA
FAFAALAIIFSVYITLVVLFVPKMRRLITRGEWQSEQQDTMRTGSSTNNNDEEKSRQLEK
ENRELEKIIAEKEERVSELRHQLSERKQLRSRHRPSANENQAPLENHQSQHFSNSNLAPV
PSLYQPTGRPAPLADKITRNNCHGSRLHLLYK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacatcacaatgctcctgccactcttactcaccctccaatccactggagccacgctg
aggaacgtgtctactgcaggctgtcacatcatcaagccccctcgcgatggagggattcgg
taccgaggtctgactcaggagcagatccgcagggtgcagatcctgccggtggattatgag
atcgagtatgtctgccggggggagcggatcatctctgggcccaaagttcgcaagtgtctg
gagaatgggagatggactgacatgagcaaggagagccgatgccttcacccatgccctcgt
gtgtggctgtctctggagaatgggcaggtccagtctgatctctctgagctggatcgctcc
ccagtcgaaggcacccagctctcctatcactgtgaccccgggttcagactgctcggggcc
aacaccagcacctgcaccaagaccggcaagtgggacaatgccaaaccagtctgccagtat
gaccgccactacactggccaggcacgctcaggtaagaagaccctctatatcggagccctg
ttccccatgagcgggggctggcccggcggacaagcctgcctgccttcggccgagatggct
ctggaacacgtcaaccggagagcagatatcttaccggactacgagctcaaactcatccac
cacgacagcaaatgtgacccaggggaagctactaagctcctgtacgagttgctctataaa
gaccccatcaagattgtgctgatgcctggctgcagctcggtctctaccctggtagctgaa
gctgcaagaatgtggaatctcattgtgctctcgtacggctccagctccccagccctctct
aaccggcaacgcttccccacgttcttccgcactcacccctcggccacgctgcacaacccc
actcgagtgcagctcttcaagaagtggaactggagcaagatcgccaccatccagcagacg
acagaagtcttcacttcaactctggatgatttggaggacagagtgaagaaggcagggatt
gaactcagtgtcagacagagttttctttcagaccctgccgtggcggtgaagaatctcaag
cgacaagacgcccggataatcgtggggctgttttatgaaacagaagctcgcaaagtgttc
tgtgaggttttcaaggagaagctttatggtaagaagtacgtctggtttctgattggctgg
tatgccgacaactggtttaagatcaatgacccgtcaatcaactgcacggtggagaacatg
accgaggctgtcgagggtcatgtgaccacagagattgtgatgctgaaccccgagatcgtg
cgtggagtgtctgacctgacctccgaggatttcctggataagatgatggctcgtctgggg
gtgatgaacccagaggagacaggggggttccaggaggctccgctggcttacgacgcggtg
tgggctctcgccctggccctcaacaagaccgccggggagctggcaaagaggggactgcgg
ctggaggacttcaactacaacaacaagaacatcacaggagagatctacaaagccatgaac
acctcctccttcatgggggtctctggtcacgttgtgttcgatgcccagggttctcgaatg
gccttgactctgattgagcagcttcaaggtggaatttacaagaaaataggatactttgac
agttccaaaggaaatctcacctggtatggaaatgacaagtggattggtgggagtcctccc
gctgaccggacagagctgattgtggaataccggttcctgtcacagaagctttttgtctct
gtagctgtatttgcaggctttggaattctgttcggaataatctgcctcactttcaacatc
tacaacagtagcgtgcggtacatccagaactcgcagccctacctcaacaacatgactgct
gtgggctgtgtgctagccctggctgctgtctttccactaggattagacaggaaacacatt
gcccagggccacttccccttcatctgccaggcacgtctctggctgttaggactggggttc
agcctggcctacggcagcatgttcacaaagatctggtgggtccacacggtcttcacaaag
aaggatgagaaaaaagacaagcgcaagcagcacttggagccctggaagctctacgctaca
gttggggttctgttggccatagatatcctgtctctgatgatctggcagattgtggatccc
cttcacatcactgtagaggagttcattaaagaggcacccaaaggtgatctcgatgtgttg
gtccagcctttacttgagcactgcaactcagagaagatgaacacatggctgggcgtggtg
tatggatacaagggtctgctgcttctgctgggaatctttctggcttacgagaccaagagt
gtgtccactgagaaaatcaatgaccaccgcgctgtcggcatggccatctacaatgtagcg
gtcctgtgtatgatcacagccccagtcacaatgatcctgaacagtcagcaggatgcagct
tttgcctttgcagcgctggctatcatcttctcagtttacatcaccctagttgtgctgttt
gtccccaagatgaggcgtttgatcactcggggagagtggcagtctgagcagcaagacacc
atgcgcactggctcctccaccaacaacaacgatgaggagaaatccagacagctggagaaa
gagaaccgtgagctggagaagatcatagcagagaaggaggaacgcgtctctgaactccgt
caccaactctctgagagaaaacagctccgatctcgccaccgcccctcggccaatgagaac
caggcccctctggagaaccaccaatcgcagcatttctccaactccaatctggcccctgtc
ccctccctataccagcccacaggccgcccagcgcccctcgcagacaaaatcactcgtaat
aactgccatggcagccgtctccacctgctctacaagtga
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