Polyodon spathula (Mississippi paddlefish): 121304391
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Entry
121304391 CDS
T07273
Name
(RefSeq) guanylate-binding protein 2-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121304391
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Gene cluster
GFIT
Motif
Pfam:
GBP
ApoL
GBP_C
RHD3_GTPase
MMR_HSR1
DUF6978
4HB
DUF3536
Motif
Other DBs
NCBI-GeneID:
121304391
NCBI-ProteinID:
XP_041091429
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All DBs
Position
37:complement(566446..580198)
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AA seq
747 aa
AA seq
DB search
MDAPQQLVKFTSDRLVINEEVAKYLSTLMGVAEVISIVGKSRTGKSYLLSRFFGDGNGFK
VEHDYKACTKGIWVWARPHPSRPDTNLLLLDTEGADDFKGGVLQDKQIFLLTSLLSSSLI
YNTMKSLNKSDTTDIIELLQAVREILTLDKSQEGSSGSLQDYLPNHFYFVIRDCQFEDCG
EEEFLQYVLNSMDTCMKENIKAAFSNMEMQLLPAPMRSLKELKPEDLDTKFQTALSEFIT
RVRDKRSTPKTVSKEKTHCTPGGIVDLARSYVRKLNNNESVCLREAAKDMTETQLNRAFR
EAWEEFQSYMQAVIDQLPMETKQLTEAHSEAQQRAMTAYEKYTSFCIDVQKTQDKKCAFS
VQIENNREVLLKINYEKSELKCGKEFAILKKKHIGPVTDYTGIEAFEKMRRQINKLIDGY
NQLSGMGPAKQAVFSELYKTELVDLLTIAYKATISFIEQQYAERKGRIQLFVAELKKTAD
IMDKLQKDSTIANVAGSSTAVAGSILTITGLALLPFTFGASAILTGVGVGVGVAGGVTTV
TADICRFVKNKDLNNDVKAAHEKIVQDLKEIAELLEYVCGQLSEEKEVGDINWMNHVYRI
FAIGNFVGVLDDIVAVGARVAANVARVAGIVLAALVIVLDSFAIIKKSIKIHEGCKTERA
KEIRDLAQSIEEELTKVEGCIAQMKNTKKSYDETSLMIQTTQLSLFAKKNTKKSYDETSL
MIQTTQLSLCQKKKTKKNHSDLKMSSR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggatgccccacagcagcttgtcaaattcacaagcgacagacttgtcatcaatgaagaa
gttgcaaagtacctatcaacactgatgggtgtggctgaggtaatatctattgttggtaag
agcagaactggaaagtcgtacctcttgtctcgcttctttggggatgggaatggatttaag
gttgaacacgactataaagcatgtaccaaagggatctgggtgtgggcaagacctcatcct
tcccgtccagacaccaatctcctgctgctggacactgagggagcagatgactttaaaggt
ggagtccttcaagataaacagatatttttactgacttcgcttctctccagcagtctgatc
tacaatacaatgaaatccttaaacaaaagtgacacgacagacatcattgaacttttacag
gcagtgagagaaatactaacgctagacaagagccaggaaggcagtagtggttctctccaa
gattatcttccaaaccatttctatttcgtgattcgagattgccagtttgaagattgtgga
gaagaggaatttctgcaatatgtgctgaattccatggatacatgtatgaaagaaaatatt
aaggcagctttttctaatatggaaatgcagcttttaccagcaccaatgagatccctgaaa
gaattgaagcctgaagacttagatacaaaattccagactgctctgtctgagtttattacc
cgtgttcgtgataaacgctccactccaaagacagttagcaaggaaaagacacactgcaca
cctggagggattgtagacctggcacggtcctatgtccgaaaactgaataataatgaaagt
gtgtgtctacgcgaggctgccaaagatatgactgaaacccaactaaaccgtgcattcagg
gaagcctgggaggagtttcagagttacatgcaggcagtcatcgatcagctacccatggaa
actaaacaactgacagaagcccattctgaggcccagcaacgtgcaatgacggcatatgaa
aaatacaccagtttttgcattgacgtgcagaaaactcaggataaaaaatgtgcattttcg
gtacaaattgaaaacaatagggaggtgctcttgaagataaattatgaaaaatctgaactg
aagtgcgggaaagagtttgccattctcaagaaaaaacacattggacctgtcacggactat
actggcatagaggcatttgaaaaaatgaggaggcagatcaacaagctgatagatggatat
aatcagctttcaggtatgggaccggcaaaacaagcagtattctctgaactctataagact
gaattagtggatttactgacaattgcttataaggcaacaattagtttcattgaacaacag
tatgcagaaaggaagggaagaatacaactttttgtagcagagcttaagaagactgcagac
atcatggataaacttcaaaaggactccaccatagcaaatgtagctggaagttctactgct
gtagctggaagtattctaaccataacagggctggcactgcttccctttacatttggagcc
tctgctatactaactggtgtaggggttggggttggtgtggctgggggtgttaccactgtc
accgcagacatatgcaggtttgttaaaaataaagatttgaacaatgatgttaaggctgca
catgaaaaaattgtgcaggacttaaaagagattgcagaactcttggaatatgtatgtggc
caactttcagaggagaaggaagtaggtgatattaactggatgaatcatgtatacaggatc
tttgccataggtaattttgtaggagtgcttgatgacattgtagctgtaggcgctagagta
gctgctaacgttgccagagtagcaggtatagtgttggctgcacttgtgatagtgctggat
tcatttgctattattaagaagtctattaaaatccatgagggatgtaaaactgaaagagca
aaagagatccgtgatctggctcaaagtatagaagaagaactaacaaaagtagagggctgt
atcgcacaaatgaaaaatacaaaaaaatcatatgatgaaacatctctaatgattcagaca
acccaactctctctttttgccaaaaaaaatacaaaaaagtcatatgatgaaacatctcta
atgattcagacaacccaactctctctttgccaaaaaaaaaaaactaaaaaaaaccactct
gatctgaagatgagctctagataa
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