Polyodon spathula (Mississippi paddlefish): 121304402
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Entry
121304402 CDS
T07273
Name
(RefSeq) protein fem-1 homolog B-like
KO
K10349
protein fem-1 homolog B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121304402
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121304402
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
121304402
NCBI-ProteinID:
XP_041091458
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All DBs
Position
37:31247..36665
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AA seq
655 aa
AA seq
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MGGWSLNGEASGRFVRNKTIKKQPGREWMDSLAGYVYKAASEGRVLTLAALLLNHCEGET
RYLLSYVTEHGGQRSTPLIIAARNGHAKVVRLLLEHYRVDTEQTGTVRFDGYVIDGATAL
WCAAGAGHFEVVRLLVTQHANVNHTTVTNSTPLRAACFDGRLDIVKYLVENHANISIANK
YDNTCLMIASYKGHTDVVKYLLEQKADPNAKAHCGATALHFAAEAGHLEIVKELVRWKAA
MVVNGHGMTPFKVAAESCKADVVELLLSHVDCDRKSRIEALELLGASFANDRENYDILKT
YHYLYLAMLERYRDPGNVIEKDVLPPIDAYGSRTECRTLSDLEVLRQDRDALHMEGLIVR
ERILGADNIDVSHPIIYRGAVYADNMEFDKCIKLWLHALELRQKGSKNTHKDLLRFAQVF
SQMIHLNEPVKAKDIENVLKCSVVEIEREMSRMKIIQESDIHAATDNYESNVFTFLYLVC
ISTKTQCNEEERARVNKQIYNLIQLDPRSKEGSTLLHLAINPNTPVDDFHTNDVCSFPNA
LVTKLLISCGAQVNAVDNEGNSPLHIIVQYNRPISDFLTLHAIIISLVEAGAHTDMTNKQ
KKTPLDKSTTGVSEILLKTQMKMSLKCLAARAVQQHEINYKNQIPKTLEEFVEFH
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctggtcgttgaacggcgaagcttctgggcgatttgtgcgaaacaagacaatt
aagaagcagccagggcgggagtggatggattcgttggccgggtacgtgtacaaagcggcg
agcgaagggcgagtgctgactttagctgccctgctgctcaatcactgtgaaggggagaca
cggtacctgctcagctatgtgaccgagcacgggggtcagcggtccaccccgctcatcatt
gcggcgagaaacgggcatgcaaaggttgttcgcttgctgctggaacactaccgggtcgat
acagagcaaaccggtactgtgagatttgatggatacgttattgatggggccactgctctg
tggtgtgcagcaggcgctggacatttcgaggttgtccgtttgctggtcactcagcatgca
aatgtgaaccacaccactgtgaccaactccacgcctctgcgggcagcctgcttcgacggc
agactggatattgttaagtacctggtggagaaccacgcaaacatcagcattgccaacaag
tatgacaacacctgccttatgatcgcatcctacaagggccacacggacgtggtgaagtac
ctgcttgagcagaaagccgaccccaatgcgaaagcccactgcggagctactgccttgcat
ttcgcagcggaggccggccacctggagatagtgaaggagctggtcagatggaaagctgct
atggtggtcaatggtcatggaatgactcccttcaaagtggcggctgaaagctgcaaagcc
gatgtggttgaacttcttctgtctcacgtggactgcgaccggaaaagccgcatcgaagct
ttagagctactgggcgcctctttcgccaatgaccgagaaaactatgacattctgaaaacg
tatcactatttgtacctggcaatgttggagcgatatagagatcccggcaacgttatagag
aaagacgtccttcctccaatagacgcctatggcagtcgcactgagtgcaggactctgagc
gatctagaggtgttgaggcaggaccgggatgcccttcatatggaaggattgatagtccgt
gaacggattttgggagcagacaacatcgatgtttctcatcctattatttacaggggagct
gtgtatgcagataacatggagtttgataagtgcatcaagttatggcttcatgcactggag
ctcagacagaagggcagcaagaatactcacaaagacttgcttcggttcgcccaggtcttc
tcccaaatgatccatttgaatgagccagtgaaagcgaaggatatagagaacgtgttgaaa
tgcagtgtggtggagatcgagagagaaatgtcgcgaatgaaaataattcaggaaagcgat
atccacgcggccacagacaactacgagtccaacgttttcaccttcctctatctcgtctgc
atctccaccaaaactcagtgcaacgaagaggagcgagctcgagtcaataagcagatctac
aacttgattcagctggatccccggtccaaggaagggtccacgttgctgcacctcgccatt
aaccccaatacgcctgtagatgatttccacaccaatgacgtgtgtagttttcccaatgcc
ctggtcaccaagctgctgatcagctgtggcgctcaagtgaatgccgtggataacgagggg
aacagccctcttcacatcatcgtgcaatacaacagacccattagcgatttcctgaccttg
catgccattatcatcagcttggtggaggcaggggctcacacagacatgaccaacaaacag
aaaaagacccccctagataaaagtactactggggtgtctgagatcctactcaaaactcaa
atgaagatgagccttaagtgcctggcagccagagctgtgcagcagcatgaaatcaattac
aaaaaccagattcctaaaactctggaagaatttgtagagtttcattaa
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