Polyodon spathula (Mississippi paddlefish): 121304414
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Entry
121304414 CDS
T07273
Name
(RefSeq) transcription factor 4-like isoform X1
KO
K15603
transcription factor 4/12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121304414
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
121304414
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GFIT
Motif
Pfam:
HLH
HHV-1_VABD
Ig-CFAP74_2
Motif
Other DBs
NCBI-GeneID:
121304414
NCBI-ProteinID:
XP_041091490
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Position
2:complement(95976033..96148953)
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AA seq
722 aa
AA seq
DB search
MFLGLCDFAKMHHQQRMAALGTDKELSDLLDFSAMRNNDLKMFPTSMMFSPPVSSGKHGP
TSVGSGHFTGASLEDRTSSGSWGNGNRPSPSKNYADGSQYNHMGNRDLGSHNMSPPYVNS
RLAGKTERGTYSYGRESNLQGCHQPSHLGGEMGMGSPGALSPTKPGSQYYQYSSINPRRR
PLHSDSMEVQTKKVRKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPPTSTFPSSFFMPD
GHHSTDPWSSSSGMNQPGYSGMLGNSSHVPQTSSYCGLHPHERQSYPSHSSTDINSSLPP
MSSFHRSGTNHYSASSCTAPTNGTDSIMANRATSGTAGSSQTGDALGKALASIYSPDHTN
NSFSSSPSTPVGSPPSLTAASTAVWSRNGAQGSSSPNYEAPLHSLQSRIEDRLERLDDAI
HVLRSHAVGPSTGMPSSHSEMHGLIGPSHNGAMGGHGSGYGTGLLSSNRHSVMVGAHRED
GVGLRGTIVPNQVPVPQLPVQSATSPELNQTPDPYRGLFPVSVQTLDKKIFVQVQSALSG
GLQGHSVSSVSSEIKSEDEGDENQDTKSLDEKKTEEDKKDIKSINSNNDDEDLSPEQKIE
REKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQ
VRERNLNPKAACLKRREEEKGSSDAPPLSLAGPHHGLGDASNPMGQMSKLPEFFKMMSDH
FL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaggtttgtgtgattttgctaaaatgcatcaccaacagcgaatggctgcctta
gggacagacaaagaactgagcgatttactggatttcagtgcgatgagaaacaacgatttg
aaaatgttcccaacatcaatgatgttttctcccccagtaagcagtggaaaacatggacca
acctctgttggaagtggacatttcacaggcgcaagtctggaagacagaacaagctctggt
tcctggggaaatggaaaccgccccagcccatctaagaattatgcagatggttctcaatat
aaccacatgggcaaccgggaccttgggtcacataacatgtcccctccttacgtcaattcc
agactagcaggtaaaacagagagaggaacatactcttacggaagagagtcaaacttacag
gggtgccatcagccgagtcacctgggaggtgagatgggtatgggtagtcctggggcactt
tcacctacaaagccagggtcacagtattatcagtactccagcattaatcccagaagacga
ccattgcacagcgactccatggaggtacagacaaagaaagtccggaaagttcctccaggt
ttaccatcctcagtatatgccccatcagcaagcactgccgattataacagggactcaccg
gggtatccatcctccaaaccaccgaccagcacctttcccagctccttcttcatgccagat
ggccatcacagtactgatccatggagctcctccagtgggatgaaccagcctggttatagt
ggaatgctgggaaactcctcacacgtcccacagaccagcagctactgtggcctccatcca
cacgagagacagagctacccgtcacactcctcaacagacatcaattccagtcttcctcca
atgtccagttttcaccgcagtggcacaaaccattattccgcctcctcctgtacagcgccc
acaaatggaacagacagcattatggcaaacagagcaacaagtgggaccgcaggcagctca
cagaccggcgatgccctgggaaaggcactagcatcaatctactctcccgatcacaccaac
aacagtttttcatcaagtccttcaacacctgttgggtctcccccttctctcacagcggca
agcacagctgtttggtcaaggaatggagcccagggatcatcatctccaaactatgaagct
ccactgcactctttgcaaagtcgcatcgaagaccggttggaaaggctggacgatgccatt
catgtgcttcgtagccacgcggtcggtccttccacaggcatgccgagcagccacagtgag
atgcacggtttaataggaccatcacacaatggggcaatgggaggacacgggtctggatat
ggcacagggctcctttcatcgaacaggcattcagtaatggtgggagctcatcgtgaggat
ggcgtgggattacgtggcacaattgtgccaaaccaagtgccagtcccccagctcccagta
cagtcagcaacttcgcctgaattaaaccagactccagatccttacaggggcttattccca
gtctctgtccagactctcgataagaagatatttgttcaggttcaatcagctctctcaggt
gggctccagggacacagcgtgtcatcagtaagctcggagatcaaatccgaagatgagggg
gacgaaaaccaggataccaagtccctggatgagaagaaaacagaggaggacaagaaggat
atcaaatcaattaatagcaataatgatgacgaggacctatcaccagagcagaagatcgag
cgggagaaggagcggagaatggcgaataatgcccgggagcgtctgcgcgtgcgtgacatc
aacgaggccttcaaggagctggggcgcatggtgcaactgcacctgaagagcgacaagccg
cagaccaagctgctcatcctccaccaggcggtggccgtcatactgagtctggagcagcaa
gtcagagagaggaacctgaacccgaaagcagcctgtctgaaaaggcgagaagaggagaag
ggatcatctgacgcgcctcctctctcccttgcggggccacatcacggattaggagatgca
tccaaccccatgggacaaatgtccaagttgccagagttcttcaaaatgatgagcgaccac
ttcctttga
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