Polyodon spathula (Mississippi paddlefish): 121304422
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Entry
121304422 CDS
T07273
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121304422 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121304422 (polg)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121304422 (polg)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121304422 (polg)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
121304422 (polg)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
121304422 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
121304422
NCBI-ProteinID:
XP_041091501
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Position
37:complement(139931..151113)
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AA seq
1219 aa
AA seq
DB search
MNRLLSKPPQQHFSKLLFTRLLQPRAGWWRGRCAPAKPLQRPEPSSQTRLNPLNIQMLSR
NLREQIFRGAAEDYREEDVERSIRHLQRHELWGRETSLLPDVELRLPHMYGDDIDQHFRT
LAQKQSYPYLEAANQLLQAQLPELPQEWAREVGWTQYGPGGEQKKVDFPDERALVFDVEV
CMAEGQCPTLAVAVSPTGWYSWCSKRLIEERYTWSTQLGLADLIPLETPPNSSKSPSGQW
SERLVVGHNVSFDRAKIKEQYLLKGSNMRFLDTMSMHMAISGLTGFQRSLWMASKHGKRQ
GLQEVKEHIKRIGRRKEGPAIGSWRWVDISSINNLADVHALYVGGAPLEKEAREIFVKGS
MSDVRSSFQELMRYCALDVLATHEVFQEQLPLLMERCPHPVTFAGMLEMGVCYLPVNQNW
GRYLEEAQGTFEELQREMKKSLMNLADEACQLLQEDRYKQDPWLWDFEWDVQEFKQKKLS
IKKKKKKEEEEEEQQQQADTETAAVQMGSQRTSEEDPGPPTEEEEMAPPAGRGLLERLKE
TVSLLPKRRQHLPGHPGWYRKLCVKLSDPDWSPGPGLISLQMRVTPKLMGLTWDGFPLHY
SDRHGWGYLVPGRRDNLEQPGGSDGPVCPYRVIESVYREHCERRGKEQPECLEIPLSEDF
MLTDGDLWQMVEELSRLEPLDNGIEEETGARRSKQKKTEEDSLDREDSPSESQPTYHHGN
GPYNDVNISGCWFFKLPHKDGNANNVGSPFAKDFLSKMEDGTLQAGPGGTNATRALEINK
MISFWRNAQKRISSQQVVWLKKGELPRTVSRHPDFDEEGQYGAILPQVITAGTVTRRAVE
PTWLTASNARRDRVGSELKAMIQVPPGYHLVGADVDSQELWIAAILGEANFARMHGCTAF
GWMTLQGKKSQGTDLHSRTAATVGISREHAKVFNYGRIYGAGRPFAERLLMQFNHRLSQP
QASEKARQMYAVTKGVRRYRLSEEGEWLVKELQIPVEREEDGSVSLLDLRKIQRLASRSS
GHRKWEVVGKRVWAGGTESEMFNKLENIAHSDAPRTPVLGCRISRALEPSVVKDEFITSR
VNWVVQSSAVDYLHLMLVCMRWLFEEFDIDGRFCISIHDEVRYLVRSEDRYRAALALQIT
NLLTRSMFAFKLGMQDLPQSVAFFSAVDIDQCLRKEVNMDCDTPSNPTGMERRYGIPQGE
ALDIYQIIEITKGSLAKGK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcctgctgtccaaaccaccacagcagcacttttccaagcttctcttcacacgc
ctgctgcagcctagagctggctggtggaggggcaggtgtgctccagccaagcccctgcag
agaccagaaccatcctcccagacccggctcaacccgctcaacatccagatgctgtccagg
aacctccgggagcagatcttccggggggcagcggaagattaccgggaagaagacgtggag
cgcagcatccgccacctccagagacacgagttgtggggccgggagacctcgctgctgccc
gacgtggagctgcgcctgccgcacatgtacggggacgacatcgaccagcatttccgaacc
ctggcgcagaagcagagctacccgtacctagaggctgctaaccagctgctgcaggcccag
ctgccggagctgccccaggaatgggccagggaggtgggctggacccagtacggaccagga
ggggaacagaagaaggtggattttcctgatgagcgggcgctggtttttgacgtggaggtg
tgcatggcagaagggcagtgccccactctggcagttgctgtgtctcctactggctggtac
tcgtggtgcagtaagcgtctgatcgaggagcgctacacctggtccactcagctgggcctg
gctgacctcatccccctggagactcctcccaactccagcaagtcccccagtgggcagtgg
agcgagaggctggtggtggggcacaacgtcagcttcgaccgggctaagatcaaggagcag
tacctgctcaagggctccaacatgcgcttcctggacaccatgagcatgcacatggccatt
tcaggactgactggcttccagcgctccctctggatggccagcaagcatggcaagaggcag
ggactgcaagaggtcaaagagcacatcaagaggatcgggcggcgcaaggagggtccagcg
attggctcgtggcgctgggtggacatcagcagcataaataacctggctgacgttcacgct
ctgtatgtgggcggggctccgctggagaaggaggcgcgggagatctttgtcaagggcagc
atgagcgatgtgcggagcagcttccaggagttgatgcggtactgcgccctcgacgtcctg
gcgactcacgaggtgttccaggagcagctgcctcttctcatggagaggtgtcctcaccct
gtgaccttcgccgggatgctggagatgggcgtgtgctacctgcctgtcaatcagaactgg
gggcggtacctggaggaggctcagggcactttcgaggagctgcagagggagatgaagaag
tcactcatgaacctggctgacgaggcgtgccagctgctgcaggaggacaggtacaagcag
gacccctggctgtgggacttcgagtgggacgtccaggagttcaagcagaagaagttgagc
atcaagaagaagaagaagaaggaggaggaggaggaggagcagcagcagcaagctgacaca
gagactgcggctgtgcagatgggctcccagaggaccagtgaggaagaccctgggcccccg
acggaggaggaggagatggccccccctgctggtagagggctgctggagcggctgaaggag
acggtcagcctcctgcccaagaggaggcagcacctgccaggacatcccgggtggtaccgg
aagctgtgtgtgaagctgtcggacccggactggtccccggggccgggtctcatcagcctt
cagatgcgggtcacccccaagctgatggggctgacgtgggacggctttcccctgcactac
tctgacaggcacggctggggatacctcgtcccggggcgcagggacaacctggagcagcca
gggggcagcgacgggcccgtctgtccctacagagtcattgagagcgtgtacagagagcac
tgtgagcgcagggggaaggagcagcctgagtgtctggagatcccactcagcgaggacttc
atgctgaccgatggggacctgtggcagatggtggaggagttgagccgcctggagcctttg
gataatgggattgaagaggagactggagccagacgaagtaaacagaagaaaacagaggaa
gattctttggaccgagaagattcccccagtgaaagccagcctacctatcaccacggtaac
ggaccctacaatgacgtcaacatatctgggtgctggtttttcaagctcccccacaaggac
gggaacgccaacaatgtgggcagcccatttgcaaaggacttcctgtctaagatggaggac
ggcacactgcaggcaggccctggcgggacgaacgccacgagagcgctggagatcaacaag
atgatctcgttctggagaaacgcacagaaacgcatcagctctcagcaggtggtgtggctg
aagaaaggggagctgccacgcactgtctccaggcaccctgattttgacgaggagggtcag
tatggtgccatcctgccacaggtcatcacagccggcacagtgacccgcagggctgttgaa
cccacctggctcaccgccagcaacgccaggcgggacagggtgggcagtgaactgaaggcg
atgatccaggtgccccctgggtatcacctggtcggagccgatgtggactcgcaggagctc
tggatagcagccatcctgggagaggccaacttcgccagaatgcacggctgcacagcgttt
ggctggatgactctgcagggtaagaagagccagggaacggacctgcacagccggacggcg
gccacagtgggcatcagccgggaacacgcaaaggtcttcaactatggccggatctacggg
gccggccggcccttcgctgagcggctcctcatgcagttcaaccaccggctcagccagccg
caggcctccgagaaggccaggcagatgtacgccgtcaccaagggggtccgcaggtacagg
ctgtcggaggagggggagtggctggtgaaggagctgcagatccctgttgaaagagaagag
gacggcagtgtgtcccttctggacttgcggaagatacagagactggcctcaaggagctca
ggacaccgcaagtgggaagtggtgggcaagcgcgtgtgggcagggggcacagagtcggaa
atgttcaacaagctggagaacattgcccactcagacgccccccgcacacctgtactgggc
tgccgaatcagcagggcgctggagcccagtgtcgtgaaggatgagttcatcacgagcaga
gtgaactgggtcgtgcagagctcggcggtcgactatctgcacctgatgctggtctgcatg
aggtggctgttcgaggagtttgatatcgacgggcgcttctgtatcagcatccacgatgag
gtgcggtacctggtgcgcagcgaggaccgataccgggctgcactggcactgcagatcacc
aacctgctcacacgctccatgtttgcctttaagctggggatgcaggacctgccccagtcc
gtggcgttcttcagtgcggtggatattgaccagtgtctgcgcaaggaggtgaatatggac
tgcgatactccctccaacccaacaggcatggagaggagatatgggatccctcagggagaa
gccctggatatttatcagattattgagatcaccaagggatcactggctaaagggaaatag
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integrated database retrieval system
