Polyodon spathula (Mississippi paddlefish): 121304526
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Entry
121304526 CDS
T07273
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121304526 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121304526 (gtf2f1)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121304526 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
121304526
NCBI-ProteinID:
XP_041091634
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All DBs
Position
38:113680..163931
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AA seq
545 aa
AA seq
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MTSLGSSGQSSTEYTVRVPKNTNKKYNVMAFNSGDKINFSTWTQAKMERDLSNKRMFQDE
EAPETGAGSEFGKKLREVSRRKKFGIVPREFKLEDQPWLLRVNGKSGRKFKGQKKGGVTD
NACYYIFTQCPDGAFEAFPVHTWYNFSTVARHRTLTAEEAEEEWDRRNKVVNHFSIMLQR
RLKDQDRDDGDDEEEDKDKGKGKGKGKGKKKKGSELKIHDLEDDLEMSSTDESNESEEGD
GDSKPKKAAADEKNKTKTNKPTKKKKRKKSGSDSEAIEDSDDGDFEGLEVDYMSESSSEE
DESEKVKPNKGQNVPKGIDEASDSSEESEEEKKEEKEEEQEEEEENEEEGKKTPIQQEKK
KKKDSSDDSDSSEDSDIDGETASALFMLRRKTPPKRPGGKGSAGSSRAGSRPGTPSLDSG
STSSTLRAAASKLEQGGKRQGGPDTPAAKRLKMEPNAQSPSGKSTPQPPSGKCTPSSSDV
HLTEEAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKSIADKMH
FYIKQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgctgggaagcagtggacagtcctccacagaatacacagtcagagtacccaag
aacacaaacaagaagtacaatgtcatggccttcaactcaggagacaagatcaacttctct
acctggacacaggcgaagatggagcgtgacctgagcaataagaggatgttccaggacgag
gaagctccggaaacgggggcggggagcgagttcgggaagaagctccgagaggtgtcccgc
aggaagaaattcgggatcgtcccccgggagttcaaactggaggaccagccctggctgctc
cgggtcaacggcaagtcaggacgcaagttcaaagggcagaagaagggcggagtgacggat
aacgcctgctattacatcttcactcagtgtcccgacggagccttcgaggcgttccccgtc
cacacctggtacaacttcagcactgtggcccgacaccgcaccctgactgcagaggaggca
gaggaggagtgggaccggaggaacaaggtagtgaatcacttcagcatcatgctgcagcgc
agactgaaggaccaggacagggacgatggagatgatgaagaggaggacaaggacaagggg
aaggggaaggggaaggggaaggggaagaagaagaagggcagcgagctgaagatacacgac
ctggaggatgacctggagatgagcagcaccgacgagagcaatgagagcgaggagggggac
ggagacagcaagcccaagaaggcggcagcggacgagaagaacaagacgaagacgaacaag
ccgacgaagaagaagaagaggaagaagagcggctctgacagcgaggcgatcgaggacagc
gacgacggagacttcgaggggctggaggtggattacatgtcagagagcagctctgaagag
gatgaatcagagaaggtgaaaccaaacaagggacagaatgtgcctaaagggatcgacgag
gcatcggacagcagcgaggagagcgaggaggagaagaaagaggagaaggaggaagagcag
gaggaggaggaggagaacgaggaggagggcaagaagactcccatccagcaggagaagaag
aagaagaaagacagcagtgatgactcggactcctcggaggacagtgatattgatggggag
acggcctcagcactcttcatgttgaggaggaagactcctcccaagaggccggggggtaaa
ggctcagcggggagctctcgggccggcagtcgccccggaacaccctccctggactcgggg
agcacctcgtccacactgcgggctgcagccagcaagctggagcaaggaggtaagcggcag
gggggcccagacacccccgctgccaagaggctgaagatggagccgaacgcacagagcccc
tccgggaaatcaaccccccagccaccgtcagggaaatgcacccccagcagcagcgatgtt
cacctgaccgaggaggctgtgcgccgctacctcatccggaagcccatgaccacgaaggac
ctgctgaagaagttccagacgaagcgcacgggtctgagcagcgagcagactgtgaacgtg
ctggcccagatcctgaagagactcaacccggaacgcaagagcatcgcagacaagatgcac
ttctacatcaagcagtga
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