Polyodon spathula (Mississippi paddlefish): 121304545
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Entry
121304545 CDS
T07273
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
pspa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121304545 (notch3)
04371 Apelin signaling pathway
121304545 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_4
Ank_5
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121304545
NCBI-ProteinID:
XP_041091660
LinkDB
All DBs
Position
38:1345692..1397735
Genome browser
AA seq
2486 aa
AA seq
DB search
MGNYRLWIFLWILSLSRGCKGFKCQDNSKPCANGGTCVENQSRCVCRSSFIGELCQFQDP
CHKSPCLNGGRCRSSVVDVAVQHTCTCQRGYRGQDCSLVDACATNPCANGARCSNWNNRY
NCSCMPGFQGKNCRNDVDECKTSGVCLNGGACLNTPGSFRCHCQPGFSGRVCEIASMPCA
PSQCLNGGTCRQTGDLTYQCACLPGFEGHNCDRNIDDCPGHKCMNGGTCVDGVNTYNCQC
APEWTGQFCTEDVNECHLQPNACHNGGTCFNTIGRHSCVCVNGWTGEDCSENIDDCATAV
CFNGATCHDRVASFFCECPVGKTGLLCHLEDACVSNPCNEGAVCDTNPLNGRAICTCPPG
FTGGACNQDVDECSIGANPCEHFGKCVNTEGSFQCQCGKGYTGPRCEIDINECLSMPCQN
DATCLDRIGEFTCICMPGFMGIYCEVDIDECESNPCVNDGQCKDVVNGFVCTCLPGFTGS
MCQIDIDECASTPCQNGAKCFDRPNGYECYCAEGFEGTVCERNSNNCDPDPCHHGSCVDG
IASFTCVCELGYTGYRCENQVNECHSNPCQNGGKCMDLVNKYLCHCQPGTSGTNCEINYD
DCASNPCDYGICQDGINRYDCICKPGFTGPLCNVEIDECQSNPCRNGGTCVDEENGFRCQ
CPEGFHDPLCYSEVDECSSSPCVRGTCHDDVNGYKCDCEPGWLGMNCDLNRNECHSNPCL
HGGTCMDQVNGYTCKCKEGFRGNLCQTNINDCASNPCLNKGTCVDGVASYTCLCDLPYTG
RDCADVLAPCSPSPCENGGVCEHSPDYESFVCTCAPGWQGQRCNMDINECATSPCKNRGT
CANTLGGFTCTCRPGFTGVNCETDTNDCAPNPCLNGGSCVDGVNSFKCTCMPGFMGTRCG
VEINECHSSPCRNGGTCTDYVNSYTCTCKLGFAGIHCEINVPDCTESSCFNGGTCFDEIN
GYTCHCRAGFTGSNCQFEINECDSQPCLNGGVCLDGLESYRCTCPLGFTGSRCQNTVDWC
SRSPCKNGGRCRQKESVYTCECPSGWTGRYCDIPSLSCEAAASQRGLGIDQLCRYGGHCV
NTGSTHYCRCSKGYTGSYCESEINQCEQNPCRNGATCRSYVGGHVCECMPGYAGPSCETE
VNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCSPSPSGRAPKCMNNGTCV
DKVGGYRCNCPPGFTGERCEGDINECHSNPCNPSNTLDCIQLPNDYQCVCKPGFNGRRCQ
STINMCESQPCQNGGKCSETVNSALGYSCTCQLNYVGPNCERSLLSCREMSCYNGGTCVN
TQLGARCNCAPGFAGPDCHLRENGSCANQPCRNGGTCRKDATFPFFQCLCRHGFNGKRCE
QSLTRMLPPPPTPEPSCPLAACRGKADDGVCDRECNTHNCQWDRGDCSLTVNPWKKCEAQ
QCWKVFNNSLCDEACNTPECLYDNFDCKKKERVCSPIYEQYCIDHYADGSCDQGCNSEEC
GWDGLDCARGVAENLAEGVLVITVLLPPQELRRTSTAFLQKLSFILHTTLRFRQDENGED
MIYPFYRSQSRIQKRELEQEIIGTIVYLEIDNRLCVTGSDPSKCFLTAENAADYLGALSA
VERLRFPYPLKEVRGERIDPPVNPELNKLLPLVVVAAVILLVILILGVLVARRKREHSTL
WFPEGFFLKKETSSNKNRREPVGQDALGMKNMPKTVEQSLLSDHTEQWLDTDCPEAKRLK
VDEPGTASDNEDAVDSRQWTQHHLAAADIRMPPSMALTPPQGEFDNDCMDVNVRGPDGFT
PLMLASFCGGGLEAEVVEEEDADDSSANIISDLIYQGASLAAQTDRTGESALHLAARYAR
ADAAKRLLDAGADANAQENTGRTPLHAAVAADAQGVFQILIRNRATDLDARMYDGSTALI
LAARLAVEGMVEDLIACHADVNAVDEIGKSALHWAAAVNNVEATLALLKNGANKDMQDLK
EETPLFLAAREGSCEAAKILLDHFANREITDHMDRLPRDIAQDRMHHDIVQLLDEYNTVR
SPQGHGMQGHHMAGGHTMSPLMCPPGAFMPGLKQTGQGKKSRRPSAKGAGQQHAGLAREA
KESAKARNKKLSLDCQGSLMESSVTLSPVDSLDSPRGGYVTNPASPAVPSAGIFHQASSM
SVPTTPVVRGLLDGPFAVSLARLSDIGELPGPGQNAAILSMNSMQPRVSVSSVNVGTGQP
NYVLNAGQLGLNLGMVSPVSVPFDWHARIPTSQCNQQVINLVHPIQTQAGIHQQHQQAVL
QQQQQQQQQQLILQQQQRMFHGSQVLVQQHSPVKMQRVAEQQKQMNQAQQQQQQQQQMQA
LVNQQKLARLGSATPPDAQPPPPLPPPPPPSQTPTQQQQQPQSQNVSQAPQFFKQMSNPP
VEDYPTPPSQHSYASAHDATPKHYLHLQNEHPYLTPSPESPEQWSSPSPHSMSDWSDSTP
SPAVVGPAHTQIPHVQEQSTKMQVFA
NT seq
7461 nt
NT seq
+upstream
nt +downstream
nt
atggggaattacagattgtggattttcctgtggattctgtcactttctcgtggctgcaaa
ggtttcaaatgccaggataattctaaaccctgcgcaaacgggggtacgtgcgttgagaat
caatcgagatgcgtgtgtcgatcgagcttcatcggagagctctgccagtttcaggacccg
tgccacaagtccccttgtctgaacggagggcgttgcagaagctcagtggtggatgtagcc
gtgcagcacacctgcacatgccagcgtgggtacagagggcaagactgctccctggttgac
gcctgcgccaccaacccctgcgccaacggtgcccgctgctccaactggaacaaccgctac
aactgctcctgcatgcccggcttccagggcaagaactgccgcaacgacgtggatgagtgc
aagacctccggcgtgtgtctgaacgggggcgcctgcctcaacaccccggggtcattccgg
tgccattgccagccaggcttctccggacgggtgtgcgagatcgcctccatgccatgcgcc
ccctcgcagtgtctgaacgggggcacctgccgccagaccggagacctgacttaccagtgt
gcctgcctgccagggttcgaaggtcacaactgtgacagaaacattgacgactgtccggga
cataagtgcatgaacggagggacgtgtgtggatggagtgaacacttacaactgccagtgc
gcacctgagtggacaggccagttctgcaccgaagacgtcaatgagtgtcacttgcagccc
aacgcgtgccacaacgggggcacctgcttcaacaccatcggtcgtcatagctgcgtgtgc
gtgaacggctggaccggcgaggactgcagcgagaacatcgacgactgcgccacggccgtg
tgcttcaacggggccacctgccacgaccgcgtggcctccttcttctgcgagtgtccggtt
gggaaaacaggtctgctctgccacttggaggacgcctgcgtcagtaacccctgcaacgag
ggggcggtgtgcgacaccaaccccctcaacggccgtgccatctgcacgtgcccccctggc
ttcaccgggggagcctgcaaccaggatgtggacgagtgctccatcggggcgaacccgtgc
gagcattttgggaagtgcgtaaacaccgagggctcattccagtgccagtgtgggaagggg
tacacgggaccccgctgcgagatcgacatcaacgagtgcctgtccatgccctgtcagaac
gatgccacctgcctcgatcgcatcggggaattcacctgtatctgcatgccagggttcatg
ggaatttactgcgaagtggatatcgacgagtgcgagagtaacccgtgtgtcaacgacggg
cagtgcaaggacgtcgtcaatgggtttgtctgcacctgtctgccaggttttacaggctct
atgtgtcagattgatattgacgaatgcgccagcacgccgtgccagaacggggccaagtgt
ttcgacagacccaatgggtatgaatgctactgcgctgaaggtttcgagggcaccgtttgc
gagaggaacagtaataactgtgatccggacccgtgccaccacggctcctgcgtggatggc
atcgccagcttcacgtgtgtctgcgagctgggctacacgggctaccgctgcgagaaccag
gtgaacgagtgtcacagcaacccttgccagaacgggggaaaatgcatggacctggtgaac
aagtacctgtgccactgtcagcccgggacgtcgggtactaactgtgagattaattatgac
gactgtgccagcaatccttgtgattatggcatctgccaagatggaattaaccgctatgac
tgtatctgcaagcctggcttcacaggccccctgtgcaacgtggagattgacgagtgccag
tcgaacccctgccggaacggcggcacctgcgtggacgaggagaacggcttccgctgccag
tgtccggagggcttccacgacccgctgtgctactccgaggtggacgagtgcagcagcagc
ccctgcgtccgtgggacctgccacgacgacgttaacggctataagtgtgactgtgagccg
ggctggttggggatgaactgtgacctcaacaggaacgagtgccactcgaacccctgtctg
cacgggggcacctgcatggaccaggtcaacggctacacctgcaagtgcaaagagggcttc
agagggaacttgtgtcaaaccaacatcaatgactgtgcctcgaacccctgcctgaataaa
gggacctgcgttgacggcgttgccagttacacctgcctgtgtgacctgccctatacaggt
cgcgactgcgcagacgtgctggccccctgctcacccagcccctgtgagaacggaggggtc
tgtgagcacagcccagactacgagagctttgtgtgcacctgtgctccgggctggcaaggt
cagaggtgcaacatggatatcaatgagtgtgccacgagcccgtgtaagaatcggggtacc
tgcgccaacaccctcggggggttcacctgtacctgccgacctggcttcaccggggtcaac
tgtgagactgacaccaacgactgcgccccgaatccgtgtctgaacggcggcagctgcgtc
gacggggtcaactccttcaagtgcacctgcatgccgggcttcatgggcacccgctgtggc
gtggaaatcaacgagtgccacagcagcccttgccgcaacgggggcacctgcaccgattac
gtcaacagctacacctgtacctgcaagctgggcttcgctggcatacactgcgagatcaac
gtccctgactgcactgagagttcctgttttaacggagggacctgcttcgacgagatcaac
ggctacacttgccactgccgggctggcttcacgggctccaactgccagttcgagatcaac
gagtgcgactcccagccctgcttgaacgggggagtgtgtctggatgggttagagtcctac
cgctgcacctgccctctgggattcaccggctcacgctgtcagaacacggtggattggtgc
agcaggtctccttgtaagaacggaggacgctgtcgacagaaggaatccgtttacacgtgc
gagtgtccgagcggctggaccggacggtactgcgacatcccgagcctctcctgtgaggca
gctgcttcccagagaggtttgggaattgaccagctttgccgctatgggggtcactgcgtg
aacacaggcagcacgcattactgccgctgttcgaagggatatactggcagctactgcgaa
agtgagatcaaccagtgtgagcagaatccctgccgcaacggcgccacctgcaggagctac
gtgggaggacacgtctgtgaatgcatgccgggctacgctgggccaagctgtgaaacggag
gtgaatgagtgccagtctcacccttgtcagaacgggggcacctgcatcgacctggtcgga
cactatatctgttcctgcccccccgggacgctaggagtgctgtgtgagatcaacgaagac
gactgctctcccagtccgagcggccgagcccccaagtgcatgaacaacgggacgtgcgtg
gacaaggtcgggggatacaggtgcaactgtcccccggggttcactggggaacgctgcgag
ggggacatcaacgagtgccactcgaacccctgcaacccctccaataccctggactgcatc
caactgcccaacgactatcaatgtgtctgcaagcctggcttcaatggacgaagatgccag
agtaccatcaacatgtgtgagtctcagccctgtcaaaatgggggaaaatgttcagagaca
gtcaactccgcgctgggatacagctgcacttgtcagctgaactacgtggggcctaactgc
gagaggagcctgctgtcatgccgggagatgtcctgctacaacggggggacctgcgtgaac
acgcagctgggcgcccgctgtaactgcgccccaggcttcgccgggcccgactgccacctg
cgggagaatggcagctgcgctaaccagccttgccgtaacgggggcacatgtcgaaaggac
gccaccttccccttcttccagtgcctgtgccgtcacggcttcaacggcaaaaggtgcgag
cagagtctcacgcgcatgctccctcccccgcccacgccggagccctcctgccctctggcg
gcgtgccggggcaaagcggacgatggcgtctgcgacagggagtgcaacacgcacaactgc
cagtgggacagaggagactgctcactcactgtgaacccttggaagaagtgcgaggcccag
cagtgctggaaggtgtttaacaacagcctgtgtgacgaggcgtgcaacacccccgagtgt
ctgtatgacaactttgactgcaagaagaaagagagggtctgcagcccgatctacgagcag
tactgcattgaccactacgcggacgggagctgcgatcagggctgcaacagcgaggagtgt
ggctgggatgggctggactgtgccaggggcgtggccgaaaacctggcggagggcgtgctg
gtcatcacagtgctgctcccgccccaggagctgcgtcgaaccagcacagccttcctccag
aaactcagcttcatcctccacaccaccctgcgcttccgccaggacgagaacggagaggac
atgatctaccccttctaccggagccagtcccgcatccagaagagagagctggagcaggaa
atcatcggcaccattgtgtacctggagattgacaatcgcctctgtgtcactggctcagac
ccgtccaagtgcttcctcactgcggagaatgcggctgattacctgggagcgttatctgcc
gtggaaagactgcgctttccctatcccctcaaagaagtccggggcgagaggattgacccg
ccagtcaatcccgagttgaataagctcctccccctggtggtggttgccgcggtgattctc
ctagtgattctcatcctgggcgtcctggttgctaggcgcaaacgggagcacagcaccctc
tggtttccggaagggttcttcctgaagaaggagacgagcagcaacaagaaccgcagggag
ccggtcgggcaggacgccttagggatgaagaacatgccaaagactgttgagcagagtttg
ctttctgatcacaccgaacagtggctggacacggactgtcctgaagccaagaggctgaag
gtggacgagccggggaccgcgtcggataacgaggacgcagtggactcccggcagtggacg
cagcaccacctggccgcggccgacatccgcatgcccccctccatggctctgacgcccccc
cagggggagttcgacaacgactgcatggacgtcaacgtcaggggacccgacggattcacg
ccgcttatgctggcctcgttctgcggtggtgggctggaggccgaggtggtggaggaggaa
gacgcagacgattcttcagccaacataatctcggacctcatctaccagggcgccagcctg
gcagcccagaccgaccggaccggagagtcggccctgcaccttgctgcccgctacgcccgc
gctgacgccgccaaacgcctgctggacgctggagccgacgccaacgcccaagagaacacg
gggcggacaccgctccatgctgctgtggctgcagacgcgcagggggtcttccagatcttg
atcagaaacagagctacggatctggacgccaggatgtacgacggctcgacggctctgatc
ctggcagcccgtctggccgtggagggcatggtggaggacctcattgcgtgccatgccgac
gtcaacgctgtcgatgaaataggtaaatccgcattgcattgggccgcggccgtgaacaat
gtggaagcaactcttgcacttttgaagaacggagcaaacaaggatatgcaggacctcaag
gaggagactcctctgttcctggccgctcgggaaggcagctgcgaagctgccaagatccta
ctggaccactttgccaaccgggagataacggaccacatggatcgcctccccagagacatc
gcgcaggacaggatgcaccacgacatcgtgcagctgctggacgagtacaacaccgtgcgc
agcccccaaggccacgggatgcaggggcaccacatggcaggaggccacaccatgtccccg
ctcatgtgcccacccggcgcgttcatgcctggcctcaaacagacggggcaaggaaagaag
tcgaggcgaccgagcgccaagggggcaggccagcagcacgccggcctggcacgagaagcc
aaggagtctgccaaagccaggaacaagaagctgtcgctggactgccagggatcgctgatg
gaaagttcggtcaccctctcgcccgtcgactcactggattctcctcgcgggggctacgtg
acgaacccggcttcaccggccgtgccgtcggcggggatcttccaccaggcttcgtccatg
tcggttcccaccaccccggtggtgcgcggcctcctggacgggccttttgccgtctccctg
gcgaggctgagcgatattggagagctgccgggtccgggtcagaacgcagccatcctgtca
atgaattccatgcagccgcgtgtctccgtgtcctcggtcaacgtcggcacggggcagccc
aactacgtcctgaacgccggccaactggggctgaacctgggcatggtgagcccggtgagc
gtgcctttcgactggcacgcccgcatccccacctcccagtgcaaccagcaggtcatcaac
ctggtgcatcccatccagacccaggctggcatacatcagcaacatcagcaagctgttctc
cagcagcagcagcagcagcagcagcagcagctgattctccagcagcagcagcgcatgttc
catggatctcaagtcctggttcagcagcacagcccggtcaaaatgcaaagagtggccgaa
cagcaaaagcagatgaaccaagctcagcagcagcagcagcagcagcagcaaatgcaagcc
ttggtcaaccagcagaaattggcccggcttggttctgccaccccaccagatgctcagcca
cctcctcctcttcctcctcctcctcctccttctcaaactccaactcagcagcagcagcag
ccacagtcgcagaacgtgtcccaagccccgcagttcttcaagcagatgagcaacccacct
gtggaggattacccgaccccgccttcccagcacagctacgcctcagcccacgacgccacg
cccaagcattacctccacctgcagaacgagcacccctacctgacgccctcccccgagtcc
cccgagcagtggtccagcccgtctcctcattccatgtccgactggtcagactccaccccc
agcccagccgtcgttggtccagcccacacccagatccctcacgtgcaggagcaaagcacg
aagatgcaggtttttgcgtaa
DBGET
integrated database retrieval system
