Polyodon spathula (Mississippi paddlefish): 121304613
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Entry
121304613 CDS
T07273
Symbol
nol6
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121304613 (nol6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121304613 (nol6)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121304613 (nol6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
121304613
NCBI-ProteinID:
XP_041091814
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Position
1:complement(590696..642204)
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AA seq
1155 aa
AA seq
DB search
MSLHNISVFSAAQNKMRHMEEMSDPSEEEEDGDEGSGGPGGLLKRSRVQGKSLGDGVLKP
VKLTKQQLYKPPTNEELNRLQETESLFHSSLLRMQMEELLKEVTLSERRRKTIDSLVQEV
TSLLASVPETTDRELSDQAWVPRGVKVPLLQAPYSVKGRFRMAPPLSVKLVGSYPLGTCS
KPDVNVDLAVTMPAILHPKDYLNQRYHHKRALYLTGLAHHLSSSHAFGSLRFTYHHGNHL
RPLLLLTPLGKEERSVTLRLHVCPPAGFFKPSRFHPRKNNVRTAWFLGQETPQQGISEPP
TPHYNNSVLSDMLLESHKSFLSASAADFPGFREGVAVIKVWLRQRELHQGYGCFNGFLAS
MLVAYLLSKHKINSMMSAYQVLRNVLQFLASTDLTESGITLVKGTDSTVPALSEFHDAFQ
VVFVDPSGHVNLCGDMTASKYRQVQHEARLSMQVWDNPKLDGFHALLMTPKPLVRTFDHI
FHLSPVVKLQAACKKMELLSELLDHAGNYVAAALPFIMSLLQRGLGDRVRLLAHSLPQSP
EWTIDSEPPKHKDKGLLSFGLLLNPEFSTNTLERGPPADSTQALEFRKLWGERAELRRFQ
DGSICEAVVWQGGSAFQKRLIPEQIIKHLLQLHAHIPESSVHYVGALLDEVIKVGREGGN
TGEEASVQVIQSYDDLSRKLWNLDGLPLTVTSVQGAHPALRYTQVFPPVPMKPDYSCFRL
EKSHRSLLPLEGKPCPAYIPAIKVICHMEGSGKWPQDREAIRHIKAAFHIRLGELLGQQH
RLTCHPAPTHLDVYKDGLVFRVQVAYHRELQILRETLTPEGMMRYQDNEEALRLELETVH
RPYLTSTLHGLQQQHSVFGATARLAKRWIGAHLLSASLSEESLDLLAASLFLQPAPHIAP
SSPQVGFLRFLHLLASFDWRNDPLVVNLNGDITATEITETKNDFIASRASLPVMFIATPK
DKKNSVWTKEGPSVQILQRLIVLAAESLRVLETQLKDPTQPQDVKMVLRPPLDIYDVLIH
LNPKQVPLHAQAVDTPHIVFSRGALPSGAAGGSGNMPVVDFNPVACYLSELRDAFEELAL
FFCDPFGGTVIAVLWKPQAFAPQPFRASHVKARLVQVKGSEAQTVPNVEAILEDFETLGA
GLVREVEVRSERWTI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcataacatctctgtgttctctgcagcccaaaataagatgaggcatatggag
gagatgtcggacccctcggaggaggaggaggacggagacgaggggagcggtggtcctggg
ggtctgctgaagaggagccgtgttcaggggaagagtttgggggacggggtcctgaagcct
gtcaaactgaccaagcagcagctgtacaaaccccccactaatgaggagctgaaccgcctg
caagagaccgagagcctgttccactcgagcctgctgaggatgcagatggaggagctcctg
aaggaagtgactctttctgagcggaggagaaagacgatcgactcgctcgtgcaggaagtg
acatcgctgctggctagtgtccctgagacgactgacagagagctgagtgatcaggcctgg
gtgccacgtggtgtgaaggtgcccctgctgcaggccccctactctgtgaagggtcgcttc
agaatggcaccccccctctctgtcaagctggtgggcagctacccccttggcacctgctcc
aaacctgacgtcaatgtggacctggccgtcaccatgccagcgatcctgcacccaaaggac
tacctgaaccagcgctatcaccacaagagggcgctgtacctgaccggcctggcacaccac
ctgtcctccagccacgcctttggcagcctgcgtttcacctatcaccatggaaaccacctg
cggcccctccttctactcactccgctcggtaaggaggagcgctcagtgaccctgcggctc
cacgtctgcccccccgccgggttcttcaagccaagccgattccacccccgcaaaaacaac
gtgcgcacggcctggttcctgggccaagagactccccagcagggcatcagcgagccgccc
acccctcactacaacaactctgtgctgagtgacatgctgctggagtctcacaagagcttc
ctgtctgccagcgctgccgacttccccggcttcagggagggggtggctgtgatcaaggtg
tggctgcgacagagagagctccaccagggttatggctgtttcaatggcttcctggcctcc
atgcttgtcgcctacctgctctccaaacacaagatcaactccatgatgagcgcataccag
gtgctgaggaatgtgctccagtttctggcctccacggacctgacagaaagcgggattact
ctggtgaaaggcacagacagcacggtgccggccctgtccgagttccacgatgctttccag
gtggtgtttgtcgatccctcgggtcacgtcaacctctgtggagacatgactgccagcaaa
tacagacaggtacagcacgaggcacgtctgtccatgcaggtgtgggataaccctaaactg
gacgggtttcatgccctcctgatgacccccaagccgctggtccgcacctttgaccacatc
tttcacctgtcccctgtggtgaagctgcaggccgcctgtaagaaaatggagctgctgtct
gagctcctggaccacgctgggaactacgtggcagcggctctgcctttcatcatgtccctc
ctgcagcgagggctgggagacagagtccggcttctggcacactccctgcctcagagcccc
gagtggacgatcgactctgagccccccaaacataaagacaaggggctgctgtccttcggg
ttgctcctgaatcctgagttcagtacaaatacgctggagaggggacccccagccgacagc
acacaggcgctggagttccgcaagctctggggcgagagggcggagctgcggcgtttccag
gacggctcgatctgtgaggctgtagtgtggcaggggggatctgcgttccagaagaggctg
atcccggagcagatcatcaagcacctactgcagctacatgcacatatcccagagtcctcg
gtgcactacgtgggggcgctgcttgatgaggtcatcaaggtgggacgagagggcggcaac
actggagaggaggcgagtgtgcaggtgatccagtcctacgatgacctgagccgcaagctg
tggaacctggatgggctgcccctgacggtgacctcggtacagggggcccaccctgcgctg
cgctacacccaggtgttccctcctgtcccgatgaagcctgactactcctgtttccggttg
gagaaatcccaccgttccctactgcccctggaagggaagccctgccctgcttacatccca
gcgatcaaggtgatttgtcacatggagggcagtgggaaatggccccaggaccgggaggcg
atccggcacatcaaggctgccttccacatccgcctgggagagctcctgggacagcagcac
cggctcacctgccaccctgcacccacgcacctcgacgtctacaaggacgggctggtgttc
cgcgtgcaggtggcctatcaccgggagcttcagatcctgagggagacgctgacccctgag
gggatgatgcgttaccaggacaacgaggaggccctgcggctggagctggagacggtgcac
cggccctacctgaccagcacactgcacgggctgcagcagcagcactctgtgtttggtgcc
acggcccggctggcaaagcggtggatcggtgcgcacctcctgagcgccagcctgagcgag
gagagcctggacctgctggcagcatctctgttcctgcagcccgcgccccacatagcgccc
agctccccgcaggtgggattcctgcgcttccttcacctgctcgcctcatttgactggagg
aacgaccctctcgttgtgaacctcaatggtgacatcacagccacggaaatcacagagact
aaaaatgattttatcgcctcccgcgcctcgctgcctgtcatgttcattgccacccccaaa
gacaagaagaactcagtctggaccaaagaggggccatcagtgcagatcctgcagaggctg
atcgttctggccgcagagagcctgcgggtcctggagacgcagctgaaggacccaactcag
ccgcaagacgtcaagatggtgctgcgtccccccctggatatctacgatgtgctgattcac
ctgaaccccaagcaggttcctctgcatgcacaggccgttgacacgccacacatcgtcttc
agcaggggggcgctgccgagcggggcggcagggggctcgggtaacatgcccgtcgtcgac
ttcaaccccgtcgcctgctacctgagcgagctgagagatgcctttgaagagctggcattg
tttttctgtgacccgtttggaggcacggtgattgcagtgctgtggaaaccacaggccttc
gcaccccagccgttccgggcatcccatgtgaaggctcggctggtgcaggtgaaggggagc
gaggcgcagaccgtgcccaatgtggaggccatcctcgaagactttgagaccctgggggca
gggctggtgcgggaggtggaggtgcgcagcgagcggtggactatctga
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