Polyodon spathula (Mississippi paddlefish): 121304638
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Entry
121304638 CDS
T07273
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121304638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121304638
03041 Spliceosome [BR:
pspa03041
]
121304638
03032 DNA replication proteins [BR:
pspa03032
]
121304638
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121304638
Spliceosome [BR:
pspa03041
]
Complex A
U1 snRNP components
Sm proteins
121304638
U2 snRNP components
121304638
Complex B
U1 snRNP components
121304638
U4/U6.U5 tri-snRNP components
121304638
Complex C
U2 snRNP components
121304638
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121304638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
121304638
NCBI-ProteinID:
XP_041091815
LinkDB
All DBs
Position
39:complement(411615..414770)
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AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKARKTLGRLMIKGDNITLLQSVAV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgaggacaaggacagaaagtgcaaaaagttatggtgcagccgattaatctt
atctttaggtaccttcagaatcgctccagaatccaggtgtggttgtatgagcaggtgaac
atgcggatagaaggttgcattattggttttgatgaatacatgaacttggtgctcgatgac
gcagaggaggtccacatgaaaacaaaagccaggaaaactctcggtcggcttatgataaaa
ggagacaatatcaccttattgcagagtgttgctgtctaa
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