Polyodon spathula (Mississippi paddlefish): 121304677
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Entry
121304677 CDS
T07273
Symbol
srsf3b
Name
(RefSeq) serine/arginine-rich splicing factor 3b isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121304677 (srsf3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121304677 (srsf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121304677 (srsf3b)
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121304677 (srsf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121304677
NCBI-ProteinID:
XP_041091879
LinkDB
All DBs
Position
39:2614282..2621214
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AA seq
173 aa
AA seq
DB search
MPSEMGDPAMHRDSCPLDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFV
EFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRTRNRGPPPSWSRRPRDDNRRRSPPA
RRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNERK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgaaatgggagatccagccatgcatagagactcttgtcccttggactgcaag
gtctatgttggtaacctgggtaacaatggtaataaaacagagctggagcgctcctttggg
tattacggccctctgcgcagcgtgtgggtggccagaaacccacccggctttgcttttgtg
gagtttgaagatccccgtgatgctgctgatgccgttagagagctggatggaaggaccctg
tgcggatgcagggtaagggtagagctctccaatggggagaagcgtacccgcaacaggggc
ccgcccccgtcttggagcagacgtccacgcgatgacaatcggaggaggagcccgccagcg
cgacgcagatcgcctcgcaggagaagcttcagccgaagccgtagcaggtctctttccaga
gataggaggagggagagatccttgtccagagaaaggaaccataaaccatcacgctccttt
tctagatctcgcagccgttccaggtccaatgaaaggaagtag
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