Polyodon spathula (Mississippi paddlefish): 121304743
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Entry
121304743 CDS
T07273
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121304743
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121304743
Retrieval pathways
121304743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121304743
NCBI-ProteinID:
XP_041092049
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All DBs
Position
39:complement(3574876..3713471)
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AA seq
523 aa
AA seq
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MATDNRIQFWKRNVKVPGSLQPVYGAQHPPLDPRIHKTFLKEEPKTNTLSIKSKRASSFL
EFAQSTNDAWDIDDDEDEEFLGGHPPTPPPSLNTKVVVATAAQAIHNYSKVREKPERVQA
NGSVVKSNSAAQLSQPSERSADLNSGLLSELSRYIPPTDDSSFRKPLHKQQSLPLRPVIP
LIARISDQNASGAPPMAVREKTRLEKFRQLLASQNTDLEELRRCSWSGVPREFRPITWRL
LSGYLPANMERREIVLKRKRDEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPLF
QQAPVQEVFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVEEDVENFDVTTLPQH
VQRNIEADSFWCMSKLLDGIQDNYTFAQPGIQTKVKALEELVSRIDEHVHNHFQKYEVEY
LQFAFRWMNNLLMRELPLRCTIRLWDTYQAEAEGFSHFHLYICAAFLIKWRKEILEAVDF
QGLLLLLQNLPTIHWGNEEVGLLLAEAYRLKYMFADAPSHYRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgataacaggatccagttttggaaaaggaatgtaaaggttccgggaagttta
cagccagtatatggagcacagcatcctcctcttgatccccggatacacaagactttttta
aaagaagaacccaaaactaacacattatctataaaatcaaaaagagcttcaagttttctc
gagtttgcccagagcaccaacgacgcctgggatattgacgacgatgaggacgaggagttt
ttgggcggccacccccctacccctcctcccagcctcaacaccaaggtagtcgtggcaaca
gcggcacaggccatacacaactacagcaaggtccgagagaaaccagagagggtccaggcc
aacgggagcgtggtcaaatcaaacagtgctgcgcagctatcccaaccctcagagcgatca
gctgaccttaactctggcctattgtcagagctctcgcgatacatcccgcctacagatgat
tcttcgtttcggaagccgctgcacaaacagcagtctctccccttgcggcccgtcatcccc
ctgatcgcaaggatctcggaccagaatgcctctggggctccaccgatggccgtccgagag
aagacaaggctggagaagttcaggcaacttctagcaagtcagaacaccgacctggaagag
ttgcggagatgcagctggtcaggcgtcccaagagaattccgcccaatcacatggaggtta
ctgtcgggttatctgcctgcaaacatggagaggagagaaatcgttctgaagaggaaacgg
gatgagtattttgggttcatagagcagtattacgactccaggaacgaggagcatcaccag
gacacctacagacagattcatattgacattccaagaacgaacccgctcattcctctcttc
cagcaagcccctgtacaggaggtctttgaacgcatcctcttcatatgggcgattcgtcat
cccgccagcgggtatgtgcagggcatcaatgatctggtcactccgtttttcgttgttttc
ctctcagaatttgttgaggaagatgtggagaattttgatgtgacaaccctacctcaacat
gtgcaaagaaacatcgaagctgacagtttctggtgcatgagtaaactgcttgatggaatc
caggacaactacacgtttgctcagccaggaattcagacaaaagtcaaagccctggaagag
ctagtgagcagaatcgatgagcatgtccacaatcacttccagaagtacgaagtggagtat
ctgcagtttgcattcagatggatgaataacctgctaatgagggagcttcccctgcggtgt
accatcagactctgggacacttaccaggctgaggcagagggattctctcatttccacctg
tacatctgcgctgctttcctcatcaaatggagaaaagaaatcctggaggcagtggacttc
caaggtctgttgttgctgttacagaacctgcctacaatacactgggggaacgaagaagtg
ggactcctgctggcagaagcttatagactcaagtatatgtttgcagatgcgccgagccac
tacaggagataa
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