Polyodon spathula (Mississippi paddlefish): 121304782
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Entry
121304782 CDS
T07273
Name
(RefSeq) leucine-rich repeat neuronal protein 2-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121304782
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121304782
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
LRR_1
LRR_9
LRR_EndoS
ig
Ig_2
LRR_R13L1-DRL21
LRR_LRWD1
LRRNT
LSR
Motif
Other DBs
NCBI-GeneID:
121304782
NCBI-ProteinID:
XP_041092111
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All DBs
Position
39:581680..608387
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AA seq
711 aa
AA seq
DB search
MKYIAMRLLQVHLLLGVISALVIQSVPWKVPCPRQCVCQIKPWYSPRSVYKEAPTVDCND
LLLSRLPDSLPTETQTLRLQSNLISSLDQTELQGLANLTELDLSQNSFTSARDLRIAGMA
GLLSLHLEENQFRHLPEAAFSGFPGLQELYLNHNQLRNISPGAFTGLDNLLRLHLNSNRL
RAVDCRWFHALPHLEVLMIGGNPVEVIQDQNFKPLGSLRSLVLAGMGLRELSEWALEGLT
SLESVSFYDNRLTKVPKEALQKVPGLKFLDLNKNPIQLVLPGDFRDMLHLKELGLNNMEE
LVSIEQSALENLPELTKLEITNNPRLSYVHPQAFQRLSSMESLMLNNNALSALHRQTIRS
LPGLQEISLHTNPIRCDCLIRWVGAEDDRSVRFIEPQSTFCSEPPELKTRRVKEVSFREM
ANSCLPLIAPGTFPSHARVRLGENLSLHCRALAEPEPSIYWVSPTGQRLSPSESYGQYKV
GSEGTLEVFGVTLEEAGLYTCVAQNLVGADTRSVAVKVIGVGKSFISSKERGGNSIILQA
REVSTRYALVSWPSRQNVPSAWLSWLDNRSAEDQHSARLLAGTRGFNLTHLKPNTQYRVC
LHLGPDDTSCLHLRTKEATATAVSPDLTPAALLATSALLLLLAVKACQGGPSSSLKEEDC
PGQEQSEKPSVCPPVPTAGECHLDMQQSQTQSSDKDCGSVDNVQNIQPQSC
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattgcaatgagacttctgcaagtccacctgctcctaggagtcatcagcgct
ctggtcatccagtctgtgccctggaaggtcccttgtcctcggcaatgtgtgtgccagatc
aagccatggtattctcctcgctcggtttataaagaagcccccaccgtggactgcaatgac
ctcctgctctctcgcttgcccgattccctgcccaccgagacccaaactcttcggctgcag
agcaatctgatcagctccctcgaccaaacagagctccaggggctagcaaacttgaccgaa
ctcgatctttctcagaacagcttcaccagcgcacgagacctacgcattgctggaatggct
ggactcctcagtctgcatctggaagagaaccagttccggcacctcccagaggctgccttc
tcaggtttcccaggcttgcaggagctgtatctcaatcacaaccagctgaggaacatctcc
cctggggctttcaccggcttggacaaccttcttcgacttcatcttaactccaaccgcctt
cgcgctgtcgactgccgctggttccatgccttacctcatctggaggtcctgatgatcgga
ggcaaccctgtggaagtcatccaagaccaaaatttcaagccactggggtccttacgcagc
ctggtcctggctggcatgggcctgagagagctctcggagtgggcattagaaggattaacc
agtttagagagtgtttcattctatgataaccgtctaaccaaagtacccaaagaggccctg
cagaaggtacctgggttgaagttcctggacctgaacaagaacccaatccagctggttctg
cctggagacttcagggatatgcttcatctgaaggagctaggactgaacaacatggaggag
ttagtttccatagagcagtcagccctagagaatctgcctgagctaaccaaactggagatc
accaacaatccacgactatcttacgtccacccacaggctttccagcgcctatccagcatg
gagagtctgatgcttaataacaatgccttgagcgctctacacagacagaccatacgttcc
ttacctggtctccaagagatcagtctgcacaccaacccgatccgttgcgactgtctgatc
cgttgggtgggtgctgaagatgataggtctgtccgcttcattgagcctcaatccacgttc
tgctcggaaccgccagagctcaagacaagaagggtgaaggaagtctcttttagagagatg
gccaacagctgcttgcctttaattgccccaggaacttttccttctcatgcacgggtcagg
cttggagagaacctgtctctacactgtcgggccttagcagaaccagaacccagcatctac
tgggtctctcccacaggccaaagactttccccatctgaaagttatggacagtacaaggtt
ggatcggagggtactctggaggtctttggagttaccctagaagaggcaggtctttacact
tgtgtggcacagaatttggttggggccgacacccgcagtgttgctgtgaaagttattggg
gtcgggaagtcttttataagtagtaaagagagaggcggtaatagcataattctgcaggca
cgggaagtctcaacacgatatgctctggttagctggccatctaggcaaaacgtcccatca
gcatggctctcctggttggataacagaagtgctgaagaccaacacagtgctcgactgcta
gcgggaactcgaggctttaacctgacacacctgaaacccaacacccagtacagagtgtgc
ctgcaccttggtccagacgatacctcctgtcttcatctcaggactaaagaagccacagca
actgctgtatctccagacctgacccctgcagctctacttgcgacctctgctttgctcctg
ctgctggcagtcaaagcttgccaaggagggccctcttccagtctgaaagaagaggactgc
ccagggcaggaacaatcagagaagccaagcgtctgccccccagtgcccacagcaggagag
tgccatctggacatgcagcagtctcagacgcagagctcggataaagactgcggcagtgtt
gacaatgttcagaacattcagccacagtcgtgctga
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