Polyodon spathula (Mississippi paddlefish): 121304873
Help
Entry
121304873 CDS
T07273
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121304873
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121304873
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121304873
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121304873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
AAA_18
Zeta_toxin
SAP_new25
KTI12
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
121304873
NCBI-ProteinID:
XP_041092220
LinkDB
All DBs
Position
40:complement(2436058..2451090)
Genome browser
AA seq
856 aa
AA seq
DB search
MSAVDVKKLKVNELKEELQARGLDARGLKADLAERLQAALDSEALGDAVAPPQGAVLGER
YAGDGEELGSGEELGSGEELGSGEELGSGEEEVADNGEDNAEDGEKGEPDEAFAMETRDT
LAEQDQGFSELHTDGLDDMSVKEESKPPPEEEEEEGAEQQPDPLEEDRKPDPEVKTEVKE
EEEEEEPKSDPVTSEQSQDGSVEPKQEKERPPQHHQSRKRPYDEGRGRGYYEHREDKRSR
SPQPPAEDDEEDFDDTLVAIDTYNCDLHFKVARDRYSGYPLTIEGFAYLWSGARVSYGVN
KGKVCFEMKINEEIAVKHLPSSEPDPHVVRVGWSLDSCSTQLGEEEFSYGYGGTGKKSTN
CKFEDFGEKFTENDVIGCFIDFEAGEEVEMAYSKNGKWLGVGFKVSKEELADRALFPHVL
VKNCAIEFNFGQKEEPFFPVPEGYTLVQSVPLEDRVRGTVGPASKAECEILMMVGLPASG
KTTWAEKHASENPAKKFNILGTNAIMEKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ
IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDV
PDHAVLEMKANFALPESGEVLDSVTYVELEKDEAEKLVKQYNEEGKKAGPPPEKRFDGRS
GGFRGRGGGGGFQRYDNRGGPHGGRGGYQSRGGSGGGYRGGYNRGGYNQNRWGNNRDGGH
GGRGGYNRNQQHGGGYSHNRTSSYKGAGGGGGASGGYNQAQAYNQGYNQGNYNQGYNYAG
YSQGYSQPAAAAATTGHSYSQQPAQPSTQQQQTYNQQYQQYAQQWSQYYQNQSQWNQYYS
NYPNYSGSTGTGSGAQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtggacgtcaagaagctgaaggtgaatgagctgaaggaggagctgcaggcc
cgggggctggatgctcgcggcctgaaggcggacctcgctgagcggctgcaggccgcactg
gactccgaggccttgggggatgcggtcgcgccgccacagggggccgtgctcggcgaaaga
tacgccggggacggcgaggaactgggatccggcgaggaactgggatctggagaggaactg
ggatctggagaggaactgggatccggcgaggaagaggtggccgataacggagaggataat
gctgaagacggcgagaagggagagccagacgaagcctttgccatggagacccgagacacg
ctggctgagcaagaccagggcttcagcgagctgcacacagacgggctggacgacatgtca
gtcaaggaggagagcaagccccccccagaggaggaggaggaggagggggctgagcagcaa
ccagaccccctggaagaagaccgcaagccagacccagaagtcaagactgaggtgaaggag
gaggaggaggaggaggaaccgaagtccgatccagtcacttcagaacagagtcaggacggg
tcggtcgagcccaaacaggaaaaggaacgcccccctcagcaccaccagagccgcaagaga
ccttacgacgagggcagaggccgtggctactacgagcaccgcgaggataagaggtccaga
tctccacagcctcctgcagaagatgacgaagaggattttgatgacactctagtggccatt
gacacctataactgtgacctgcacttcaaggtagcgcgtgaccgctacagcggttatccg
ctgaccatcgagggcttcgcttacctctggtcaggcgctagagtctcctacggtgtcaac
aaaggcaaagtctgcttcgagatgaagatcaatgaggagatcgctgtgaagcaccttcct
tccagcgagccagacccacatgttgtgagagtcggctggtctttggactcctgcagcact
cagcttggagaggaggaattctcttatggctacggaggaaccgggaagaaatccaccaac
tgcaaattcgaggatttcggggagaagttcacggagaatgatgtcatcggctgtttcatt
gatttcgaggccggcgaggaggtggaaatggcttactccaagaacggcaagtggctgggc
gtggggttcaaggtgagcaaggaagagctggcggaccgtgccctgttcccccatgtcctg
gtcaagaactgcgccatcgagttcaactttggacagaaagaggagcccttcttccctgtc
cccgaggggtacaccctggtgcagagcgtgcctctggaggaccgggttcggggcaccgta
ggacccgcctccaaggcagagtgcgagatcctgatgatggtgggcctgcccgcgtctgga
aagacaacctgggccgagaagcacgcctctgagaacccagcaaagaagttcaacatcctg
ggaaccaacgccataatggagaagatgaaggtgatgggtcttcgtcgacagcgtaactac
gctggccgctgggacgtgctgatccagcaggcgactcagtgcttgaaccgcctgatccaa
atcgcagcgcgcaagaaacgcaactacatcctggatcagacaaatgtttatggatcagcc
cagagacgaaaaatgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtccc
acggatgaggatttaaaagagcgaacgttaaagcgcactgatgaggagggaaaggatgtg
cctgatcatgctgtgttagaaatgaaagcgaacttcgctctcccggagtccggcgaggtt
ctggacagcgtgacctacgtggagctggagaaggacgaggcggagaagctggtgaagcag
tacaacgaggaggggaagaaagcggggccccccccggagaagaggttcgacgggcgctcc
ggagggttccggggccgcggaggaggagggggcttccagagatacgacaaccgcggggga
cctcacgggggcagagggggataccagagcagagggggctcgggaggtggctacagagga
ggctataaccgcggcggctacaatcagaaccgctggggcaacaaccgggacgggggccat
ggggggcgaggcggctacaaccggaaccagcagcatgggggggggtacagccacaaccgc
acttccagctacaagggcgccggtggaggggggggagcctctgggggttacaaccaggcc
caggcctacaaccaaggctacaaccagggcaactacaaccagggctacaattacgctggc
tacagccagggctacagccagcccgctgccgcagctgccaccaccgggcacagctacagc
cagcagccggcccagccctcaacgcagcaacagcagacctacaaccagcagtaccagcag
tatgcccagcagtggagtcagtattaccagaaccagagccagtggaaccagtactacagc
aattaccccaactactcgggcagcacagggactggctcaggggcccagtaa
DBGET
integrated database retrieval system