KEGG   Polyodon spathula (Mississippi paddlefish): 121304873
Entry
121304873         CDS       T07273                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121304873
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121304873
Spliceosome [BR:pspa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    121304873
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     121304873
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 AAA_18 Zeta_toxin SAP_new25 KTI12 SDE2_2C
Other DBs
NCBI-GeneID: 121304873
NCBI-ProteinID: XP_041092220
LinkDB
Position
40:complement(2436058..2451090)
AA seq 856 aa
MSAVDVKKLKVNELKEELQARGLDARGLKADLAERLQAALDSEALGDAVAPPQGAVLGER
YAGDGEELGSGEELGSGEELGSGEELGSGEEEVADNGEDNAEDGEKGEPDEAFAMETRDT
LAEQDQGFSELHTDGLDDMSVKEESKPPPEEEEEEGAEQQPDPLEEDRKPDPEVKTEVKE
EEEEEEPKSDPVTSEQSQDGSVEPKQEKERPPQHHQSRKRPYDEGRGRGYYEHREDKRSR
SPQPPAEDDEEDFDDTLVAIDTYNCDLHFKVARDRYSGYPLTIEGFAYLWSGARVSYGVN
KGKVCFEMKINEEIAVKHLPSSEPDPHVVRVGWSLDSCSTQLGEEEFSYGYGGTGKKSTN
CKFEDFGEKFTENDVIGCFIDFEAGEEVEMAYSKNGKWLGVGFKVSKEELADRALFPHVL
VKNCAIEFNFGQKEEPFFPVPEGYTLVQSVPLEDRVRGTVGPASKAECEILMMVGLPASG
KTTWAEKHASENPAKKFNILGTNAIMEKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLIQ
IAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDV
PDHAVLEMKANFALPESGEVLDSVTYVELEKDEAEKLVKQYNEEGKKAGPPPEKRFDGRS
GGFRGRGGGGGFQRYDNRGGPHGGRGGYQSRGGSGGGYRGGYNRGGYNQNRWGNNRDGGH
GGRGGYNRNQQHGGGYSHNRTSSYKGAGGGGGASGGYNQAQAYNQGYNQGNYNQGYNYAG
YSQGYSQPAAAAATTGHSYSQQPAQPSTQQQQTYNQQYQQYAQQWSQYYQNQSQWNQYYS
NYPNYSGSTGTGSGAQ
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgagcgccgtggacgtcaagaagctgaaggtgaatgagctgaaggaggagctgcaggcc
cgggggctggatgctcgcggcctgaaggcggacctcgctgagcggctgcaggccgcactg
gactccgaggccttgggggatgcggtcgcgccgccacagggggccgtgctcggcgaaaga
tacgccggggacggcgaggaactgggatccggcgaggaactgggatctggagaggaactg
ggatctggagaggaactgggatccggcgaggaagaggtggccgataacggagaggataat
gctgaagacggcgagaagggagagccagacgaagcctttgccatggagacccgagacacg
ctggctgagcaagaccagggcttcagcgagctgcacacagacgggctggacgacatgtca
gtcaaggaggagagcaagccccccccagaggaggaggaggaggagggggctgagcagcaa
ccagaccccctggaagaagaccgcaagccagacccagaagtcaagactgaggtgaaggag
gaggaggaggaggaggaaccgaagtccgatccagtcacttcagaacagagtcaggacggg
tcggtcgagcccaaacaggaaaaggaacgcccccctcagcaccaccagagccgcaagaga
ccttacgacgagggcagaggccgtggctactacgagcaccgcgaggataagaggtccaga
tctccacagcctcctgcagaagatgacgaagaggattttgatgacactctagtggccatt
gacacctataactgtgacctgcacttcaaggtagcgcgtgaccgctacagcggttatccg
ctgaccatcgagggcttcgcttacctctggtcaggcgctagagtctcctacggtgtcaac
aaaggcaaagtctgcttcgagatgaagatcaatgaggagatcgctgtgaagcaccttcct
tccagcgagccagacccacatgttgtgagagtcggctggtctttggactcctgcagcact
cagcttggagaggaggaattctcttatggctacggaggaaccgggaagaaatccaccaac
tgcaaattcgaggatttcggggagaagttcacggagaatgatgtcatcggctgtttcatt
gatttcgaggccggcgaggaggtggaaatggcttactccaagaacggcaagtggctgggc
gtggggttcaaggtgagcaaggaagagctggcggaccgtgccctgttcccccatgtcctg
gtcaagaactgcgccatcgagttcaactttggacagaaagaggagcccttcttccctgtc
cccgaggggtacaccctggtgcagagcgtgcctctggaggaccgggttcggggcaccgta
ggacccgcctccaaggcagagtgcgagatcctgatgatggtgggcctgcccgcgtctgga
aagacaacctgggccgagaagcacgcctctgagaacccagcaaagaagttcaacatcctg
ggaaccaacgccataatggagaagatgaaggtgatgggtcttcgtcgacagcgtaactac
gctggccgctgggacgtgctgatccagcaggcgactcagtgcttgaaccgcctgatccaa
atcgcagcgcgcaagaaacgcaactacatcctggatcagacaaatgtttatggatcagcc
cagagacgaaaaatgcgtccttttgaaggttttcaacgcaaggctattgtaatttgtccc
acggatgaggatttaaaagagcgaacgttaaagcgcactgatgaggagggaaaggatgtg
cctgatcatgctgtgttagaaatgaaagcgaacttcgctctcccggagtccggcgaggtt
ctggacagcgtgacctacgtggagctggagaaggacgaggcggagaagctggtgaagcag
tacaacgaggaggggaagaaagcggggccccccccggagaagaggttcgacgggcgctcc
ggagggttccggggccgcggaggaggagggggcttccagagatacgacaaccgcggggga
cctcacgggggcagagggggataccagagcagagggggctcgggaggtggctacagagga
ggctataaccgcggcggctacaatcagaaccgctggggcaacaaccgggacgggggccat
ggggggcgaggcggctacaaccggaaccagcagcatgggggggggtacagccacaaccgc
acttccagctacaagggcgccggtggaggggggggagcctctgggggttacaaccaggcc
caggcctacaaccaaggctacaaccagggcaactacaaccagggctacaattacgctggc
tacagccagggctacagccagcccgctgccgcagctgccaccaccgggcacagctacagc
cagcagccggcccagccctcaacgcagcaacagcagacctacaaccagcagtaccagcag
tatgcccagcagtggagtcagtattaccagaaccagagccagtggaaccagtactacagc
aattaccccaactactcgggcagcacagggactggctcaggggcccagtaa

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