Polyodon spathula (Mississippi paddlefish): 121304876
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Entry
121304876 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121304876
09142 Cell motility
04810 Regulation of actin cytoskeleton
121304876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121304876
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121304876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
Cdh1_DBD_1
FF
NOG1
Motif
Other DBs
NCBI-GeneID:
121304876
NCBI-ProteinID:
XP_041092222
LinkDB
All DBs
Position
40:322986..366870
Genome browser
AA seq
1551 aa
AA seq
DB search
MMAKKQDARTPTHNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTS
DFGGRVVNNDHFLFWGEVMRPVEEGWECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
STKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLLVDGFLLCVDVSRGMNRNFDDQLKFV
NNLHNQLAKTKKPVVLVLTKCDEGVERYIKDSHTFALTKKNLVVVETSARSNVNVDLAFL
TLVQLIDKSRGKPKIIPYYEALKQQSQQIATSKDRYEWLVSRIVKNHNENWPNICRRMQS
SPEYQEYVFLEGTQKAKKLFLQHVHRLKQEHIEKRRKMYLGTLPQALNCLIPELEEIDRL
SWSRVQHLLETKGDFSNWFVVLDETPWDATSHIDNMEDERIPLDLLDTVVAEQVYDAHLQ
RLRNERKRAEMRRLFKESLETSPFITAGKPWEEARSFIMNEEFYQWLEEPEYLDIYNRHQ
KEIIERAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAERD
ALVLKHIHFVYHPTKETCPSSSQCGDSKIEQLLASRFLVRPHHQDSGNHKSYTPSADSKA
DRINLVILGKDGLARELANEIRALCTSDDRYLLDGKMYELSLRPIEGNVRLPVNSFQTAS
FQPHGCLCLYNSKESLSYVLESIEKSRESTLGRRDNHMAQLPMTLILVTKRGVGSIGDIG
GETTHSLIIQGQQVASKLQCVFLDPASTGLGYGRSVNEKQINQVLKSLLDSKRNRNLVGG
GGSGSPSLHPVSSIKDLHHQQQQQLQNPEADLRIVMCLMCGDSYDVDQLLSPLLLPQHCR
PSQSSASSGSSVLLELSVGGQRQSIDLSILSYHSSFSVRKSRLVHGYIVVYSAKRKASLA
MLCAFLCEIQDIIPVQLLAVGESQSELTDCEAARDQLSQGEELAQEIEGRFASVVCDGSG
SLLLQQQHRVDLFNHFFKDVVEKKTIVEATHMYDNVAEACSTNESVHSPRGGSPSPVTTL
LDSEDDVEPSSPYASLREDNTFSSHGGVKLPSTCELEASDTFSLISDIRTFESKLNNKVP
PPVRPKPTGHFDFRKVNTSSFMDTGSHRRSLPSAVTWAPGDGGYDPSDYAEPMDAVAKPR
PSEEDTIYSIPDGITQGKIITVRNTNKTHSNGGGNGSDSEVDSSSLERRRKLSSVGAKPR
LYRDRSKRLGKFSSFRTSFSIGSDDELGGPPRKKAEDESGPNKGDNSVIENEGEDPKRRN
ILKSLRRTTKKTRPKPRHSLTKPPMESNYFGVPLVNVVSAERPIPLFIEKCIRYIEATGI
STEGIYRVSGNKAEMESLQRQFDLDHSLDFAEKDFTVNAVAGAMKSFFSELPDPLVPYSM
QAELVEAHKINDREQKLHTLKDVLRKFPKENLELFKYVISHLNKVSHHSRQNLMTSENLS
ICFWPTLMLPDFTTTDALTATRTYQTIIELFIYQCDFFFYNQPIAETPSGLPGSPTTMTT
SSNYSPYSTSPAASQNQQSPPHSPPATPLSPVQSLLPALNPHTLPPEQQIL
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaaaaagcaagatgcccggacgcccacccacaacctgattgtggtgggtctg
tccgggacggagaaggagaagggccagtgcggggttggcaagtcttgcctctgcaaccgc
tttgtccgccccagtgccgatgacttctacctagaccacacttcggtgctgagcaccagt
gactttgggggccgagtggtcaacaacgatcacttcctcttttggggggaggtgatgagg
ccggtagaggagggatgggagtgccggatgcacgtggtggagcaaacagagtttatcgat
gaccagactttccagccccaccgcagcacagccttgcagccctacatcaagcgggcagcc
tccaccaaactggcttcagcagaaaagctgatgtacttttgcacagaccagctggggctg
gagcaggactttgagcagaagcagatgcccgagggcaagcttctggtggacggcttcctc
ttgtgtgtggacgtaagccgcggaatgaaccgcaacttcgacgaccagctgaagttcgtc
aacaacctccacaaccagctggccaagaccaagaaacccgtagtcctggtgctgactaaa
tgtgatgagggtgtggaacgatacatcaaggactctcacaccttcgccctcaccaaaaag
aatctggtggtggtggagacgtctgcgcgctcaaacgtgaatgtggacctggccttcctc
acgctggtgcagttgattgacaagagcaggggtaaacccaagatcatcccctactatgaa
gcactcaagcagcagagccagcagatcgccacctcaaaggaccgctacgagtggctcgtg
agccgcatcgtcaagaaccacaatgaaaactggcccaacatctgcaggaggatgcagtcc
tccccagagtaccaggagtacgtcttcttggaaggcactcagaaggccaagaagctcttt
ttgcagcacgtgcacaggctcaagcaggaacacatagagaaacggcgcaagatgtacctc
ggcacattgccccaagctttgaactgcctgatacccgagctggaggagatcgaccgcctc
agctggagccgggtccagcacctgctagagacaaagggagacttttccaactggtttgtg
gtcctcgacgagaccccgtgggatgccacgtcgcacatagacaacatggaggacgagcgc
atccccctggacctgctggacactgtggtggctgagcaagtctacgacgctcacctgcag
aggttgcgcaatgaacggaagcgggcagagatgcggcgactcttcaaagagagcttggag
acgtctcccttcatcacggctggaaagccctgggaggaagcacgcagcttcatcatgaat
gaggagttctaccagtggctggaggaaccagagtatctggatatttataaccggcaccag
aaggaaatcatcgagcgggcgaaggaggacttccaggagttgctcctggaatattcagag
cttttctatgagttggaggtagatgccaagcccagcaaagagaagatgggggccatccag
gaggtcctgggcgaggagcagaggttcaaggccctgcagaagctgcaggcagagcgggat
gccttggtcctcaagcacatccactttgtctaccatcccaccaaggagacatgcccaagc
agttcacaatgtggggacagcaagatcgagcagcttctggcctcccgcttcctggtgcga
ccccaccatcaggacagtgggaaccacaagtcatatacaccgtcggcagacagcaaggct
gaccggatcaacctggtcatcctgggcaaggacgggctggcccgagaactagccaatgaa
atccgggctctctgcaccagtgatgaccggtacctgctggacggaaagatgtatgaactc
tcgctgcggcccattgaaggcaacgttcgcctacctgttaactctttccagacagcctct
ttccagccccatggctgcctctgcctctacaactccaaggagtccttgtcctacgtcctg
gagagcatagaaaagagtcgggaatccactctgggcaggagggacaaccacatggcacag
ctccccatgactctcatcctggtcacaaagcgtggggtcggttctataggagacataggt
ggagagactacccacagcctgatcatccagggccagcaggtagccagcaagctccagtgc
gtctttttagacccggcttcaacaggcttgggctatggccgcagtgtgaatgagaagcag
atcaaccaggttttgaagagcttgctggactcgaaacggaaccgtaacctggtgggtggg
ggtggttctggctccccatctctccatccagtgtccagcattaaagacttgcatcatcaa
cagcagcaacagttacagaaccctgaagcagacctgcgcatcgttatgtgtctgatgtgt
ggggattcatacgacgtcgaccagctcctttcccctctcctgcttccccagcactgcagg
ccttcccagtcatcagccagcagtgggagctcggtcctccttgagctatcagtaggtggc
cagcgacagagcatcgacctctccatcctctcctaccactcttccttcagcgtgcgcaag
agccggctggtgcatggttacatcgtagtgtactctgccaagcggaaggcctctctcgcc
atgctgtgcgcttttctctgcgagatccaggatatcatccctgtgcaactcctagccgtc
ggtgagagccagtctgagctgactgactgcgaggcagccagggaccagctgagccaaggc
gaagaactagcccaggagatcgaagggaggtttgccagtgtggtttgtgacgggagtggg
agcctgctcttgcagcagcagcacagagtagacctcttcaaccatttcttcaaagatgtg
gtggagaagaagactatagtggaggctactcacatgtacgacaacgtggcggaggcctgc
agcaccaatgagagcgtccactcccctagaggaggctcgcccagcccggtcaccaccctg
ctggactccgaggatgacgtagagccctcttcgccttatgcctctctccgggaggacaac
accttctcttcccatggtggggtcaagctcccgtccacctgcgaactggaagccagcgac
accttctccctcatctcggatatcaggacatttgagagcaagctcaacaataaggtgcca
ccgccagtccggcccaagcctacaggccactttgacttccgcaaagtcaacaccagcagt
ttcatggacacgggcagccacaggcgctcgctcccatcggcggtcacatgggcccctggg
gacggaggctacgacccttcagattacgcagagcccatggacgcagtggccaagcctcgg
cccagcgaggaggacactatctactccattcctgatggcatcacacaaggcaagatcatc
acggtccgcaacaccaacaagacacactcaaatggtgggggcaacgggtcggacagcgag
gtggacagcagctcgctggagcgtcggcgcaagctctcctccgttggcgccaagcctcgg
ctgtaccgagaccggtccaagcggctgggcaagttcagcagtttccgcaccagcttctcc
atcggcagcgacgacgagctgggaggaccgcccaggaagaaggcagaggacgagagcggg
ccaaacaagggcgacaactcggtgatcgagaacgagggagaggaccccaagaggaggaac
atcctcaagagccttcgcaggaccaccaagaaaactaggcccaagcctcgacactccctc
accaaaccccctatggagagcaactatttcggggtgccgctggtcaacgtggtatcagca
gagcggcccattcctctcttcattgagaagtgcatcagatacattgaggcgacagggatt
agcactgaaggaatctaccgagtgagtggaaacaaggcagagatggagagcttgcagagg
cagtttgatctggatcacagtctggactttgcggagaaggacttcactgtgaacgcggtg
gctggagccatgaagagtttcttctcagagctgcctgatcccctggtgccctacagcatg
caggcggagcttgtggaggctcacaaaatcaacgaccgggagcagaagctgcacacactc
aaggacgttctgaggaagttccccaaggagaacctggagctcttcaaatatgtcatcagt
cacttgaacaaggtaagccatcacagccgtcagaacctgatgactagtgaaaacctgtca
atctgcttctggccgacgctgatgctgccggacttcaccaccacggatgccctgactgcc
acccgcacctaccagacaatcatcgagctcttcatctaccagtgcgatttcttcttctac
aatcagcccattgctgagacccccagcgggctgccaggatcccccactaccatgaccacc
agctccaactactccccttactctacctccccagccgcctcccagaaccagcaatcccca
ccccactcgccccctgccactcccctctccccagtgcagtctctcctgccagccctgaac
cctcacaccctgccacctgagcaacagatactgtga
DBGET
integrated database retrieval system
