Polyodon spathula (Mississippi paddlefish): 121304941
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Entry
121304941 CDS
T07273
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121304941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121304941
03032 DNA replication proteins [BR:
pspa03032
]
121304941
Spliceosome [BR:
pspa03041
]
Complex A
U1 snRNP components
Sm proteins
121304941
U2 snRNP components
121304941
Complex B
U1 snRNP components
121304941
U4/U6.U5 tri-snRNP components
121304941
Complex C
U2 snRNP components
121304941
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121304941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
121304941
NCBI-ProteinID:
XP_041092322
LinkDB
All DBs
Position
40:complement(3922767..3927000)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMNPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctcaacaagcccaagtctgagatgaaccccgaggagctgcagaagcgtgag
gaggaggagttcaacacaggcccgctgtctgtgctcacacagtccgtcaagaacaacacg
caggtcctcatcaactgccgcaacaacaagaaactgctggggcgtgtcaaggcctttgac
aggcactgcaacatggtcctggagaatgtgaaggagatgtggaccgaagtgcccaagagt
gggaagggcaagaagaaatccaagcctgtcaacaaggaccgctacatctccaagatgttc
ctgagaggagactctgtcatcgtggtgctgaggaacccgctcatcacagggaaataa
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