Polyodon spathula (Mississippi paddlefish): 121304987
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Entry
121304987 CDS
T07273
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121304987
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121304987
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121304987
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121304987
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121304987
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121304987
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121304987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
Motif
Other DBs
NCBI-GeneID:
121304987
NCBI-ProteinID:
XP_041092386
LinkDB
All DBs
Position
40:3764501..3776785
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AA seq
650 aa
AA seq
DB search
MSDLLLGEMEERTLHQPTKDAGHGRSFLLVDENEKLQVRDELDFLERLDCQAVEGVKVLS
IFGNTGDGKSHTLNHCLFGGEEVFPTSPLQDSCTVGVWAAFEPALGLVALDTEGLLGASS
SQNQRMRLLLKVLAVSDVVVYRTRAERLHNDMFQFLGSASSAYLRHFTRELRALSSRCGL
EVPLSSLGPAVIVFQETSSTRLLGWESSTPGQADILLQKRFHELGLSTEAFCSVQYVGTQ
TVSSPTDYSGLLSALKQQVRNTATRSPRPPAIVYSALQALSDRFSGEISVEKVNLYCFFP
DEYFTCSSVCLSCGVRCKNGMNHLRDNIPHLAEGLCQYAHQYNNKVLICKKCYEGGREVI
VIPKTSASNENPWFGLAVYAWSGYVLECPCCGIIYRSRQYWIGNQDPESCVVRPEVKHVW
PGSETFLTDHRNAAQRMLDGMNFVIQSVSDYSSGPTKAVTAWITDQVAPPYWRPNADITA
CSGCEKLFEEPERKHHCRACGEGFCQACSSKTMPVPERGWGSAPVRVCDSCYRQGGGGSD
VSRTEPVGLMARKVTEVAQSTVDFVSTAIDYPLGFIKGVARPDYWVPDHEIQQCGHCSKA
LFPRMSKHHCRACGGGFCAQCSSARRPVPSRGWDHPVRVCTHCSQNKGEL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcttctgctcggagaaatggaggagcgcactctgcaccagccgaccaaggac
gcggggcacggcaggagtttccttttggtggacgaaaacgagaagctgcaggtacgggat
gagctggatttcctggagaggctggactgccaggcggtggagggggtcaaggtgctctcc
atcttcgggaacacgggcgatgggaagtcccacacgctgaaccactgcctgttcggggga
gaggaggtgttccccacctcacccctgcaggactcctgcaccgtgggtgtgtgggcggcc
ttcgagcctgcgctggggctggtggcgctggacacggaggggctcctgggcgccagcagc
agccagaaccagcgcatgcgactgctgctcaaggtgctggcggtgtcggacgtggtggtc
taccgcacgcgggccgagcggctgcacaacgacatgttccagttcctgggcagcgcctcc
agcgcctacctgcgccacttcacccgcgagctccgtgccctgtcaagccgctgcgggcta
gaggttcccctgtccagcctgggcccagccgtcatcgtcttccaggagacctccagcacc
aggctgctcggctgggagagcagcacgcccggtcaagcggacatcctgctgcagaagcgc
ttccacgagctggggctgtccaccgaggcgttctgctccgtgcagtacgtgggcacgcag
accgtcagctcccccacagactactcggggctgctgagcgccctcaaacagcaagtgagg
aacacagccacgcgctcgcccagaccccctgccatcgtctacagcgcactgcaggctctg
agtgatcggttcagcggagagatctcggttgagaaagtcaatctgtactgtttcttccct
gacgagtatttcacctgctcctctgtctgtctgagctgtggggtgcgttgtaagaatggc
atgaatcacctgagagacaacattcctcacctggctgagggcctgtgccagtatgcacac
cagtacaacaacaaggtgctcatctgtaagaaatgctacgaaggaggcagggaggtgatt
gtgatccctaaaacatcagcgtccaatgagaatccctggtttggactggctgtgtatgcc
tggtcagggtacgtgctggagtgcccttgctgtgggattatctaccgcagccggcagtac
tggattgggaaccaggatccggagagctgcgtggtgcggcccgaggtcaagcacgtctgg
cccgggagcgagacgttcttgacggaccatcggaacgcagcgcagcgcatgttggacggg
atgaactttgtgatccagtctgtctctgattacagctcaggacccaccaaagctgtcaca
gcctggatcactgaccaggtggcgccaccctactggagaccaaatgcagacattactgcc
tgctcggggtgtgaaaagctgtttgaagagcccgagaggaagcaccactgccgggcctgt
ggggagggcttctgccaggcctgctccagcaagaccatgccggtgccggagaggggctgg
ggcagcgcgcccgtccgtgtctgcgattcctgctaccgccaaggaggaggggggagcgat
gtttccagaactgagccggtgggtctgatggctcgcaaggtgacagaggtggctcagagc
acggtggactttgtttctactgcgatagactatccacttggtttcattaagggagtggcc
cggcctgactactgggttccagaccacgagatccaacaatgtgggcactgcagtaaagcg
ctcttccccaggatgtcaaaacaccattgccgggcctgcgggggcgggttctgtgcccag
tgctcgagcgcgcggcgcccggtgccatcccgcggctgggaccaccctgtgcgggtctgc
acccactgcagccagaacaaaggggagctgtag
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