Polyodon spathula (Mississippi paddlefish): 121304989
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Entry
121304989 CDS
T07273
Name
(RefSeq) suppressor of cytokine signaling 5-like
KO
K04698
suppressor of cytokine signaling 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121304989
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121304989
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GFIT
Motif
Pfam:
SOCS_box
SOCS
SH2
Motif
Other DBs
NCBI-GeneID:
121304989
NCBI-ProteinID:
XP_041092388
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All DBs
Position
40:830487..865264
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AA seq
558 aa
AA seq
DB search
MSYINCVAATLNPELVGPQSRIQTNATTAQKHEKMSQSMDNEDRGGRDNDRGARPKVRQS
RSEERRESGSRRRGKKKCRLPQAPTVSQTFEYMEDLNADSPGTKGSSAPERQKRLGQESA
TTLQELESDSSVVVEEEDGGGSKLPSGRSLRQKIQDAVGQCFPIKSQNAQSPTLLTSRRK
IHLSELMLDECPFPAGSDLAQKWNLIKEHTTPISQPALLGTLGSSGGNETVAVSGDDTSS
GSASGCSSVIVEDEDDRLRERRRISIEQGVDPPPNAQIHTFEVTAQINPLYKLGPKLAHG
MNELAGDERATLQQLRLQQEEQNSLDTLEEVMQMASSNTAAPPPSSSFSTFSPSAVVVAP
AALPTLPPAAHPLFKFQESYRVHTQIDYIHCLVPDLLQITNLPCYWGVMDRYEAEALLEG
KPEGSFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFSFDVHDPSVFHATTVTGLLE
HYKDPNSCMFFEPLLSNPTHRSTPFSLQHICRAVIASCATYDGIDFLPIPSSLKEYLKEY
HYKQKVRVRRVDTWWERV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagttatataaactgcgtagcagctaccctgaaccccgaacttgtgggaccgcaatct
agaatacagacaaacgctaccaccgctcaaaaacacgagaagatgtcacaatccatggac
aatgaggaccgaggaggcagggacaacgaccgcggtgcccgtcccaaagtgagacagagc
cgttcagaggaaaggagggagagcggcagccggagaagaggaaaaaagaagtgccggctg
cctcaggcaccgacagtgagccaaacttttgaatatatggaagatttaaacgcagattcg
cctgggaccaaagggtcatccgctccggagaggcaaaaaaggctcgggcaggaaagcgcc
accacccttcaggagctggaatcggacagttctgtggtggtggaggaagaggatggaggt
ggtagcaagttgcccagcgggcgatccttgcggcagaagattcaggatgccgtggggcaa
tgctttcccatcaagagccagaatgctcagtcacccactttgctcacctctcggaggaag
atccaccttagcgaactcatgcttgatgagtgccccttcccggctggctctgacttagcc
cagaagtggaacctcatcaaggagcacacaacaccaatttctcagcctgctttactggga
actctgggcagcagtggtggaaatgaaacagtagcagttagtggggatgacactagctct
gggagtgccagtggttgttcttcggttatagtggaagacgaggatgaccgattgagggag
aggaggcgaatcagtattgagcaaggagtggatccgccacccaatgcccaaatccacaca
tttgaggtgactgcccagatcaaccccctttacaagctgggaccaaagctggcacacggg
atgaacgagctggcaggagacgaacgggccactttacagcagctacggctgcagcaggaa
gagcaaaattccttggacaccttggaagaagtaatgcagatggcctcttctaacactgct
gctcctcctccttcttcatctttttctacgttttctccttctgcagtcgtagtcgctccg
gctgccctaccaactttaccaccagctgcccatccgctcttcaagttccaggagagctac
cgggtccacacccagattgattacatccattgtctggttccagatcttctccagatcacc
aacctcccctgctactggggcgtgatggaccgctacgaggctgaagcccttctagaaggc
aaaccagaaggttccttcctgctccgtgactcggcccaggaagattaccttttctcggtc
agcttccgtcgttacggtcggtccctgcacgcccgtatcgagcagtggaaccacaatttc
agctttgacgttcatgaccccagcgttttccacgctaccactgtcacgggtctactggag
cactacaaagaccccaattcttgcatgttcttcgaacctcttctctccaacccaacccac
cgctccactcctttcagtcttcagcacatctgtcgcgcggtcattgccagctgtgccacc
tatgatggcatcgacttcctccccatccctagctcgctcaaggagtatcttaaagaatac
cattataagcagaaggtgcgcgttaggagggtagatacatggtgggagagggtataa
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