Polyodon spathula (Mississippi paddlefish): 121305015
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Entry
121305015 CDS
T07273
Name
(RefSeq) calpain small subunit 1-like
KO
K08583
calpain, small subunit 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121305015
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C2: calpain family
121305015
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Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
121305015
NCBI-ProteinID:
XP_041092431
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All DBs
Position
40:2004480..2011514
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AA seq
214 aa
AA seq
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MFLAKKLIGGLLDVVGNVDQFAPSEPPPPRRPLQYAEQHESEEERQFRRVFQQLAGEDME
VSPVELMDILNKIVSKHSELKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIKKW
QGVYKQYDADRSGTIGASELPGAFQAAGFPLNDQLYQMIIRRYSDERGNMDFDNYIGCLV
RLDAMCRAFQTLDKDRNGTIKVDIKEWLQLTMYS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttgccaaaaaattgatcggtggccttcttgatgtcgtcggaaatgttgaccag
tttgccccctcagagccaccacccccgcggcgccccctccagtacgctgagcagcacgag
agcgaggaggagcggcagttcaggagagtgttccagcagcttgccggagaagacatggaa
gtgagcccagtggagctgatggatattctcaacaaaattgttagcaaacacagcgaactc
aaaactgatggattcagcatcgagtcttgccgaagcatggtggcggtgatggatagcgac
agcacaggcaagctgggctttcatgaattcaaacacctctggaacaacatcaagaaatgg
cagggggtgtataagcagtatgatgctgaccgttctggtacaatcggagcgtcagagtta
ccgggtgctttccaagctgcaggattccctctgaatgaccagctgtaccagatgattatt
cgtcgctatagtgatgagagagggaacatggactttgacaattacatcggctgcctggtt
cgcctggatgccatgtgccgtgccttccaaaccctggacaaagatcgcaatggaaccatt
aaagtggacattaaggagtggctccagttgaccatgtactcttag
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