Polyodon spathula (Mississippi paddlefish): 121305039
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Entry
121305039 CDS
T07273
Name
(RefSeq) claudin-3-like
KO
K06087
claudin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecules
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121305039
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121305039
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121305039
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121305039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121305039
04147 Exosome [BR:
pspa04147
]
121305039
04515 Cell adhesion molecules [BR:
pspa04515
]
121305039
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121305039
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121305039
Exosomal proteins of colorectal cancer cells
121305039
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
L1 family
121305039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF7139
Motif
Other DBs
NCBI-GeneID:
121305039
NCBI-ProteinID:
XP_041092482
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All DBs
Position
41:870244..872023
Genome browser
AA seq
216 aa
AA seq
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MYSAGLEILGVTLSVIGWLGSLVACILPMWKVAAFIGQNIVVAQVIWEGLWMNCVVQSTG
QMQCKVYDSLLGLPDDLQAARAMTVVSILLTIVGFLVFVAGAKCTNCMEDEARKPKVIIS
SGIIFIISGMMQLIPVSWSANVITMDFYEPLLGESQKREFGHSMYFGWGAACLLLLGGAL
LCCSCPQPEQTYRPSRVAYSASNNVTTSVYDKKDYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgccgggctagagatccttggagttactttgtctgtcattgggtggctgggt
tccctggtagcctgcatcttgcccatgtggaaggtagcagctttcattgggcagaacatc
gtggtggcacaggtcatctgggaaggtctctggatgaattgtgtggtgcagagcactggg
cagatgcagtgcaaggtctatgattccctgctagggcttccagatgatctccaagctgcc
cgagccatgacagtcgtctccatcctgctgacaatcgtgggctttctggtctttgtggct
ggagccaaatgcaccaactgcatggaggacgaagctcgcaaaccgaaagtcatcatcagt
tctgggatcatctttatcatttctgggatgatgcaactcatccctgtttcctggtcggcc
aatgttatcaccatggacttctatgaacccctcctgggcgaatcacagaagagggagttt
gggcattcgatgtactttggttggggtgcagcttgtcttctgctccttgggggtgcccta
ctctgctgctcctgtccacaaccggagcagacatatagaccatctagagtggcttactca
gcttcaaacaatgtcacgaccagtgtatatgacaagaaggactatgtgtga
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integrated database retrieval system
