Polyodon spathula (Mississippi paddlefish): 121305075
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Entry
121305075 CDS
T07273
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03020
RNA polymerase
pspa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121305075 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
121305075 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121305075 (polr2j)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121305075 (polr2j)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121305075 (polr2j)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121305075 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
121305075
NCBI-ProteinID:
XP_041092537
LinkDB
All DBs
Position
41:complement(1956056..1958223)
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AA seq
94 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDL
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctccagccttcgagtccttcctgttatttgaaggagagaaaaaaatcacc
ataaccaaggatacgaaagtacccaatgcctgcttattcacgcttaacaaggaagaccac
acgcttggaaacatcatccgctcccagttgctgaaggatcctcaggtcctgtttgccggg
tataaggtgccccatcctctggaacacaagattgtgatccgggtgcagaccactccggac
tacagccctcaggaggcctttaccaacgccatcacagatctg
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