Polyodon spathula (Mississippi paddlefish): 121305082
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Entry
121305082 CDS
T07273
Name
(RefSeq) pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121305082
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Vision
Opsin
121305082
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srw
TAS2R
Motif
Other DBs
NCBI-GeneID:
121305082
NCBI-ProteinID:
XP_041092547
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All DBs
Position
41:3443068..3450083
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AA seq
356 aa
AA seq
DB search
MQSNDSTEVPGVENQMPGPFDGPQWPHLAPRSTYISVAVLMGTVVVCSSFVNGLVLVVSL
RYKKLRSPLNYILVNLAVADLMVTFFGSTVSFSNNVNGYFIMGETVCKFEGFMVSLTGIV
GLWSLAILAFERYIVICKPMGDFRFQQKHAVIGCSFTWVWSLIWTAPPLFGWCSYVPEGL
RTSCGPNWYTGGSNNNSYVLMLFVTCFVMPLSMIIFSYGNLLVTLRAVAAQQKESETTQR
AEREVTRMVIAMVMAFLICWLPYTTFALVVAINKDIVIQPTLASMPSYFSKTATVYNPII
YVFMNKQFRNCMLTMMCCGKNPFSTEDESSASGSSTAGRTEISSVSAGGSSKVNPA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaacgacagtacagaagtgcctggtgttgagaaccagatgcccggccccttt
gatggaccgcagtggcctcacctggccccccgcagtacctacatctccgtggcagtgcta
atgggaactgtggtagtgtgttcaagttttgttaacgggctggttcttgtggtttctctg
cgttacaagaaattgcgctctccgcttaactacatcctggtcaacttggcagttgctgac
ctcatggtgaccttcttcggcagcactgttagcttttccaacaacgtcaatggctacttc
ataatgggcgaaactgtgtgcaagtttgagggcttcatggtctccttgacaggtatcgta
ggtctctggtctcttgccatcctggcctttgagcgctacattgttatctgcaagccaatg
ggagatttccgcttccagcagaagcatgctgtgattggctgctccttcacatgggtgtgg
tctctgatctggacggctcctcctctctttggctggtgcagctacgttcctgaagggttg
aggacctcctgtggtcctaactggtacaccgggggttccaacaataactcatacgtgctg
atgctgtttgttacctgcttcgtgatgcctcttagcatgatcattttctcttacggcaac
ctgcttgtaacgttgcgagctgtggcagcgcaacagaaagaatccgagaccactcagcgt
gccgaacgggaggtgacgcgcatggtgatcgccatggtgatggccttcctgatctgctgg
ttgccctacaccaccttcgcattggtggtagccatcaacaaggacattgtgatacagccc
acccttgcctcgatgccctcctacttctccaagaccgccactgtctacaatcccatcatt
tacgtcttcatgaacaagcagttccgtaactgcatgctgacgatgatgtgctgtggcaag
aacccgttctctactgaagacgagagctctgcatcgggctccagcacagctggccgcaca
gagattagttcagtgtctgcaggagggagcagcaaggtcaacccagcttaa
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