Polyodon spathula (Mississippi paddlefish): 121305172
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Entry
121305172 CDS
T07273
Name
(RefSeq) rab11 family-interacting protein 5-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121305172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121305172
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121305172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
121305172
NCBI-ProteinID:
XP_041093028
LinkDB
All DBs
Position
1:107821108..107871102
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AA seq
631 aa
AA seq
DB search
MSLLNVDDDHRWMPTHVQVTVLRASGLRAKGKHGTSDVYTIIQVGKDKFSTSVLEKTTSP
EWKEECSFELLPGVLEADSKSAYPPGSSDLVLTVMHRALIGLDNFLGQAVIPLDKIFQEK
RSRKNEWYTLHSKSGKKEKERGEIQVTVQFTRNNLTASMFDLSMKDKPRSTFSKLKDKMK
GKRGEGESASAIVPSRIGALSERGVRSASEGGGEQENEEHEEGKRSKVRGFFKKPKLRKS
SDSRSNTSLASGSSVSSSPGGSLSPTAGISVVVSDLSNSPSVSSNLTDSPVHTSQPSPKL
LTHKRAFSDEASQVIAMPQHREVEKLKAKDNPLSQSSLCINGSHVYAVDTPAPSTLPKVT
LGVLQKSSTLSRSLQNLAKKSEETPKANLDTRRWSLDKTGSKEGGKLVALLGNQDDSTQA
TPGHKGKPVERATQIVSTANVQPAAVKRAEEVKNEEHKKHKLHLFGGKNESKGSDAVKSG
DMSPTGQHPEEKHRGWFGSKEAQNKPSPHPVKPLGSSAPLDDKRHGGSSVPISVLEKLKS
TVRPVHSTLQGQHHAGGIKALTSQDHAARYYHLTHDELIALLLEREAELDKQGAELQKWE
VKVHDLEEYIDRLLVHIIEETPTLLQVPQGK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttaaacgtagacgatgatcatagatggatgccgacccacgtccaggtgaca
gttcttcgggcttcgggcttgagggcgaaaggtaaacatgggaccagcgatgtatacact
atcatccaggtggggaaagataaattctccacctctgtgttggagaagaccacgtctccc
gaatggaaagaggaatgctcctttgagctactccccggggtccttgaggcagacagtaag
tccgcttatcccccggggagcagtgatctggtcctaaccgtcatgcatagagcgttgatc
ggactggataactttttggggcaagctgttatcccgctggataaaatctttcaggagaag
aggtcgcggaagaacgagtggtacacgctgcactccaagtctggaaagaaagagaaagag
cgaggtgagatccaggtgaccgtgcagttcacccgaaacaacctgacggcgagcatgttt
gatctgtccatgaaggacaagccccgctccacattcagcaaactcaaggacaagatgaag
gggaagagaggcgagggggagtctgcctctgccatcgtgcccagcaggattggagcgctg
agcgagaggggggtccgcagtgccagtgaggggggtggggaacaggaaaacgaggagcac
gaggaagggaagaggagcaaagtgaggggcttcttcaagaagccgaagctgcgcaagtcg
tcggacagccgctccaacacttctctggcctcggggagcagcgtgtcatcctcaccgggg
ggcagtctaagccccactgcagggatcagcgtggttgtgtctgacctctccaactcccct
agcgtcagcagcaacctgacggacagccccgttcacaccagccaaccttccccaaagctg
ctgacccacaagagggcattcagtgatgaggcaagccaggtcatcgctatgccccagcac
agagaggtggagaaactgaaggccaaggacaacccgctctcccagtcctccctgtgcatc
aatggcagccacgtctacgcagtggatacgcccgccccttcgacgctgccaaaggttacc
ctgggagtgcttcagaaatcctccaccctctcccgctcccttcagaacctcgccaagaag
agcgaggagacccctaaagcgaatctagacacccggcggtggtccctggacaaaactggc
agcaaggagggagggaagctggtggcgctgcttggaaaccaggatgattccacccaagcc
acacccgggcataaaggcaagccggtagagagagccacccagattgtttccactgccaat
gtgcaaccagccgctgtgaagcgtgcagaggaggtgaagaacgaagaacacaagaagcac
aaactgcacttgtttggggggaagaatgagtcgaagggcagtgatgcagtcaagagtgga
gacatgagccccactggccagcaccccgaggagaagcacaggggctggtttggctccaag
gaggcccaaaacaaacccagccctcacccggtgaagcccctcggctcctctgcccccctg
gatgacaagaggcacggtggcagctctgttcccatcagtgtgcttgagaagctgaaatcc
actgtgcggccagtacacagcacgctgcaggggcagcatcatgcagggggtattaaggcc
ctgacttctcaagaccatgcagcccgctattatcacctgacccacgatgagctcatcgca
ctcctgctggagcgggaggcagagctggacaagcaaggggcggagctgcagaagtgggag
gttaaggtgcacgatctggaggagtacattgacaggctgctggtgcatatcatagaagag
acacccacccttctgcaggtgccccagggcaaatag
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