Polyodon spathula (Mississippi paddlefish): 121305207
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Entry
121305207 CDS
T07273
Symbol
setd1a
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121305207 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121305207 (setd1a)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
121305207 (setd1a)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121305207 (setd1a)
HMT complexes
COMPASS/SET1 complex
121305207 (setd1a)
COMPASS/SET1 complex (yeast)
121305207 (setd1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
121305207
NCBI-ProteinID:
XP_041092683
LinkDB
All DBs
Position
42:complement(2955938..2978750)
Genome browser
AA seq
2108 aa
AA seq
DB search
MDQECEGDAQRGVNFQWRSYKLIVDPALRRAAQKVYRYDGVEFSVPDSGYTPVGEQRDPR
PRRIWSRHREISLPIPKFKLDEFYVGQIPLKEVTFARLNDNIREPFLADMCRKFGEVEEI
EILLHPKTRKHLGLARVLFTTTRGAKDTVKNLHSTSVMGNIVHAQLDIKGQQRMKYYELL
VNGSYTPQTVPTGGKALTDKFLPPTAQLPDTSTDVRRRSSTDLPVSSSGPSGFVLTGMAA
GLPVGIPGNSTPCSQDTGFSSGRLDTPSSFSGPFTPSNASSSSQGGTPYTPRGGTPFSQD
SPFSVRQGTPGYTGGGGGGGGGGGGGGSYHQDPLMSSSVISSSSTSLPPLSSSSSSSSSS
LPVGYKIRQTSRELPRLSPRPLNKSQSSSSLGRTRGGHVWPLFLFLATRRANETPLPRVQ
RRPAQVKGRKYAVTAGERLPFLSSRGHHHHHHHSSSLSERREDRGYRSSSSGRSGPESYS
SGYHRHRNHNSRDPERYSENPSSSSTAAASSTTAEAASSSAKAYLKDNPRSSPLPVSAPP
PATAASRFEQPSGDKDYRVLPPLPPAPVPALPESGGVGSSSSSSSSTSSTAATSNSSEGL
YSPRLRAGLSETADSPAEPVSAQLQPRPRSPAPESQPEPPRTGDPTPAGSASGSPARAGS
PAPDSTNESLPFTPHHSSLDSRIEMLLKEQRAKFSFLSSDEGEEGEEKEEKKKKKEGKQE
AGERRRKGEESIRVGRRRGGRKEGREGPRSPATSPPTSKTAASATPAGTDCFEETAPSRG
GADPRRRNPAHNGQEQDYVNHGMGNGSLVEGRTMELMDRLGNQYGGLPLSFQMQTQMLSR
LHQMRLSNNTASAQPSPGDPASSSSPSKVGGSFHPFDYATYPPPPYHEPDGPSSFDQDHR
FPPPPPSPLPPPVASSSPTTTPTHRLQHLPTGFPPGPHLPPHLPTHLPSAWGRCLPPQGV
YPSSSQGLPLPSPAGSYPAYPVQSDPHEATVESVLSSLIQEMKSIMQRDLNRKMVENIAF
GTFDEWWERKELKAKPFQSAVKPSAKEEEKKEEKLKLREPGLVSLVDWAKSGGMVGLEGF
GLGAGGLRGALRLPSFKVKRKEPLELSEGGDLKRARPSTPDDDGDRDSKAGPRGEDDDDE
EEDERRRKSRHKRRKSFDLDSEGEETSDDSSSDKEGEEEDDDPEEESEDEVVSDASSKAD
SDEEESESSSDSESSSGSSSSSSSSSSEEEEEEEEEEVVSRRRDEEEETADTMDDSTMDG
SVAEVEDRDVFSEMAAEKTASLEVRPEKCEQPKKADKPPDDIMQLPPPIVRSQLPLPLPP
SESLLPARKDATPILPPLKKRRKTVSFCMEEDHNDNTRSEQLPAAALLSVTQPAAPIALS
LSSAMLSPVKSQPPESILTTPKTEPSSPVLLPFSNFPKPSESGMGSSPVRKDAPDILTIP
PPLRPAAAAPETLPPTPPRAQAQLKPSRRSPKMICRTVLNLPLDHASLVKAPVEEPVTSR
GRPRGRPRTVSQPVGSAEDSDQKLTLKEQLGASTLLELANTAAFSSSSPTRPDPGSPVDL
SVLADVALHKLPLAGGEEEEEQEEEGGDKLSGGDLYLGDSEETETSDEAEEQRMLGGPPR
PPQESPLSVLLEHNYAKPLVPSPATPRKGSGNKAAEPPASVTLNHDMETVLEAPEEVIGE
SAPLPVSAATPSPTSSSSVAGVGKTEPGVGELREEKRKGEEVEDETAPVVTGQRGKRKGR
KKRRKEKQKQQKLSQAEEEEEEIDVEDLEPGQVMNSEEEDEGEERRKSKRLIQLQAADGG
PRQPQKRTAPPAGPLRYEQRSEFEQMTILYDIWNCGLDVEDMRLLKLTYEKLLQEDHRTD
WLNDTHWVHHTITNIPNPRKRKRSQDKQLREHKSGCARGEGYYSISKREKDIYLDVYPVS
ARELEYDSQESRLXKKRRSEQRRLLSAIGTQAVMDSDLLKLNQLKFRKKKLRFGRSRIHE
WGLFAMEPIAADEMVIEYVGQNIRQVVADMREKRYAQEGIGSSYLFRVDHDTIIDATKCG
NLARFINHCCTPNCYAKVITLESQKKIVIYSKQAIGMNEEITYDYKFPIEENKIPCLCGT
ENCRGTLN
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaatgtgagggagatgcccagagaggcgtgaatttccagtggagaagctat
aaactgatcgtggaccctgccttgcgccgggcagcccaaaaagtgtatcgatacgatgga
gttgagttcagcgttcctgactctggctacacccctgtgggggaacagcgagatccacgt
cctcggaggatttggtccagacaccgagagatctcgcttcccatcccaaagttcaagctg
gatgagttttacgtgggtcagatcccactgaaggaggtgactttcgcccgacttaacgac
aatatcagggagcccttcctggcagacatgtgccggaagttcggggaggtggaggagatc
gagatcctgctccatcccaagactcggaagcacctgggcctggccagggttctgttcacc
acgacccgcggagctaaggacaccgtgaagaacctgcacagcacctccgtcatggggaac
atcgtccacgcgcagctggacatcaaggggcagcagaggatgaaatactacgagctcttg
gtgaacggctcttacaccccccagacggtgcccacggggggcaaagctcttacagacaaa
ttcctcccacccacagcacagctccctgacacatccacagatgtccgtcgcagatcttcc
actgatctcccagtcagcagcagtggccccagtggttttgtcctgaccggcatggctgca
gggctaccagtaggcatccccggaaacagcaccccctgttcccaggacactggcttttcc
agcggccggctagatacccccagctctttttcggggcccttcacccccagcaacgcctct
tcctcctcgcaggggggtaccccttatactccgaggggaggaacccctttttctcaggac
tctcctttctcagtcaggcaggggactccgggctacacaggaggaggaggaggaggagga
gggggagggggcgggggcggcagttaccaccaggaccctctgatgtcctcgtcggtaata
tcctcttcctctacctccctgccacccctgtcctcctcctcctcctcctcctcctctagc
ctccctgttggttacaagatccgccagacgtcaagagaactaccaagactcagccctcgg
ccccttaataagtcccagtcgtcttcatctctaggtcgtacgcgcggaggccacgtatgg
ccactattcctcttcctagctacacgccgagccaacgaaacaccactaccccgcgtacag
cggcggccggcccaggtaaaagggagaaagtacgcagtgactgcaggggagcgtcttccc
ttcctgagttctcggggtcaccaccaccaccaccaccactcctcctccctgtcggagagg
cgagaggacaggggttacagaagcagcagcagcggccgttcggggccggaatcttactcg
tccggctaccaccggcacaggaatcacaacagccgggacccggagcgctactccgagaat
ccctccagttcgtccacggcggccgcctcttccacgacagcggaagccgcctcctcttcc
gctaaagcgtacctcaaagacaacccccgttcctcgcccttgcccgtctccgccccgcct
cccgcaaccgctgcctcccgttttgaacagccgtcgggcgacaaggactacagggtcctc
cctcctctcccgcccgccccagtgcctgctcttccggaaagcgggggcgttggcagcagc
agcagcagcagcagcagcacaagcagcacggctgccaccagcaattcctccgagggattg
tactctccccgccttcgcgctggactttcggaaacagccgacagtccggctgagcccgtt
tcagcgcagctgcagcctcgcccacgctccccagcacccgaatcccaacccgaaccccct
cgaactggagatcccacgccagctggctctgcctcgggctccccggcccgtgccggatcc
ccggcccccgattcgaccaacgagagcctgccgttcactccgcaccacagcagcctggac
tctcgcatcgagatgctgctcaaggagcagcgggccaagttttctttcctaagctccgac
gagggagaggagggagaggagaaggaggagaagaagaagaagaaggaggggaagcaggag
gccggagaaaggaggagaaaaggggaggagtcgatcagggtggggcgcaggagagggggg
aggaaagaagggagggaggggccaaggagcccggccacatcccctccgacttcaaagacc
gctgcctcagctaccccggctggaacagactgcttcgaagaaacggcgccctctagaggc
ggggcagatcctaggaggagaaaccctgcacacaatgggcaagagcaggactatgtcaat
catggaatggggaacgggagtctggtcgaggggaggaccatggagctgatggaccgactg
ggtaaccagtacggcggcctgcccctgtccttccaaatgcagacccaaatgctcagcagg
ctccaccaaatgaggctgagcaacaacacagcttcagcgcagcccagcccgggcgaccct
gcatcatcctcctccccttcgaaagtcgggggctccttccaccccttcgactacgccaca
tacccccctccaccttaccacgaaccggacgggccttcctccttcgaccaggaccatcgc
ttcccccctccacctccctcccccctgcctccccctgttgcctcctcctcgccaaccacc
acacccactcaccgcctccagcacctgccaaccgggtttccccccggaccccacctgcct
ccccacctccctacccacctcccctccgcctggggtcgctgcctgcccccgcaaggggtc
tacccctcctcttctcaaggcctgccccttccctcccctgccggttcttaccctgcctac
ccggttcagagtgacccgcatgaggccacggtggagagcgtgctgtcctccctcatccag
gagatgaagagcatcatgcagagagacctcaaccgcaagatggtggagaacattgccttc
gggacgtttgatgagtggtgggaacgcaaggagctgaaagccaagccattccagagtgct
gtcaagccctcggcgaaagaagaagagaagaaggaggagaaactgaagctcagagagccg
ggtctggtctccctggtggactgggcaaagagcggagggatggtcgggctggagggcttc
gggctgggggcgggggggctcagaggggccctcagactcccgtccttcaaggtgaagagg
aaagaaccacttgagctgtctgaggggggtgatctgaagagagcccgcccctccactcct
gatgatgatggtgaccgggactcgaaggccgggccgaggggagaggacgatgatgacgag
gaggaagatgaacgcaggaggaagagccgacacaagcgaaggaaatccttcgatctggac
agcgagggagaggagacttccgacgactcgtcctctgataaagagggtgaggaagaggat
gatgatccggaggaagagtcagaagacgaggtggtgagcgatgcctcctcgaaagccgac
tcggacgaagaggagagcgagtcttcgtcggactcggagagcagctcgggatcctcttcc
tcctcctcctcctcctcctccgaggaagaagaggaggaggaagaggaggaggtggtgagc
cggcggagggacgaggaagaggagacggcagacaccatggacgactccacgatggatggc
tctgtggcagaggtggaggatagagacgtcttctctgaaatggccgctgaaaagacggcg
agtttggaggtcagaccagaaaaatgcgagcagcccaaaaaagcagacaaacccccggat
gacatcatgcagctgcctccccctattgttcgctcccagctcccactccctctcccccct
tccgaatccctcctgcccgcccgcaaagacgccaccccgatcctgcctcccctcaaaaag
cgccggaaaaccgtttccttctgcatggaggaagatcacaatgacaacacgcgctctgag
caactgcccgctgccgccctgctctctgtgacccagccagccgctccgatcgccctttcc
ctttcctctgccatgctttccccagtcaaatcccagcctccggaatccatcctgaccacc
cccaaaacagagccctcctccccagtcctcctgcccttctccaacttccccaaacccagc
gaatctggcatggggagcagccctgtcagaaaagacgcccccgacatcctcaccatcccc
cctccgctacgcccagctgccgctgccccagagaccctgcccccgactccgccccgcgcc
caagcccagctcaaaccaagccgtcgcagccccaaaatgatctgccgcaccgtcctcaac
ctgcccctggatcacgcgtctttggtcaaagcgcctgtggaggagccggtgaccagcagg
gggcgccctcgaggccgtcccagaaccgtgagccagccggtgggatcagcggaggattca
gaccagaaactgacactgaaggagcagctgggagcctctactctcctggagctggccaac
actgccgccttctcctcctcctccccgacccgccccgaccctggctcgccagtcgacctc
tccgtgctggctgatgtcgctctccacaagctgccgctcgctggaggggaggaggaggag
gagcaggaggaggagggaggagacaagctctctgggggcgacctgtacctgggggattca
gaagagacagagacctcggacgaggcagaggagcagaggatgctgggagggccccctcgt
cccccacaggaatccccgctctcggtcctgctggaacacaactacgccaagcccctcgtc
ccgtcgccagccaccccgaggaaaggaagtgggaacaaggcagccgagcccccagcttct
gtgactttgaatcacgacatggagaccgttctggaagcgccggaggaggtcatcggggag
tctgctcccctgcccgtctctgccgccactccctcccccacctcctcctcttccgtcgcg
ggggtgggcaagacagagcccggggtcggggagctgcgtgaggagaagaggaaaggggag
gaggtagaggatgagaccgctcccgtcgtcacgggccagcggggcaagagaaagggaaga
aagaagaggaggaaagagaagcagaagcagcagaagttatcgcaggcagaggaggaagag
gaggaaatagacgtcgaggatttagaaccaggccaggtgatgaactctgaagaggaagac
gagggggaggagaggaggaagagcaagaggctgatccagctgcaggcggcagacgggggc
cccagacagccgcagaagaggacggcgccccccgctggcccgctgcggtatgagcagcgc
agcgagttcgagcagatgaccatactctacgacatctggaactgcgggctggacgtggag
gacatgcggctcctcaaactgacctacgagaagctgctgcaggaggaccacaggacagac
tggctcaacgacacccactgggtccatcacaccatcaccaatatcccgaaccctcggaaa
aggaagagatctcaggacaagcagctgagggagcacaagtctggctgcgccagaggcgag
gggtactactcgatcagcaagagagagaaagacatctacctggacgtgtatcctgtgagc
gccagagagctggaatatgactcccaggaatcacgactttaaaaaaagcgcaggtcggag
cagagaaggttgctgagcgctattggcacccaggctgtcatggacagcgacctgctgaag
ctgaatcaactcaagttccgtaagaagaagcttcgctttggcaggagtcggattcacgag
tggggcctctttgccatggaacccattgctgctgacgaaatggtcatcgaatacgtggga
cagaacatccgacaggtggtggcggacatgcgcgagaagcgatatgcccaggaggggata
gggagcagctatctgttcagagtggatcacgacaccatcattgatgccaccaaatgtggc
aacctcgcccgattcatcaaccattgctgcacgccgaactgctatgccaaagtgatcacc
ctggaatcccagaagaagatcgtgatctactccaagcaggcgatcggcatgaacgaggag
atcacgtacgattacaaattccccatcgaggagaacaaaatcccttgtctgtgcggcacg
gagaactgcaggggaacgctgaactaa
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integrated database retrieval system
