Polyodon spathula (Mississippi paddlefish): 121305225
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Entry
121305225 CDS
T07273
Name
(RefSeq) RNA-binding protein FUS-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121305225
09122 Translation
03015 mRNA surveillance pathway
121305225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121305225
Spliceosome [BR:
pspa03041
]
Complex A
Other components
Complex A specific factors
121305225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
121305225
NCBI-ProteinID:
XP_041092702
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All DBs
Position
42:3293916..3305261
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AA seq
541 aa
AA seq
DB search
MASNDYSQTAAQGYGAYGAQAGQGYTQPPAQAYSQQSYASYGQSSDTSAASYSQGGYGAA
YGQTQTGGYGAQPASQGYSQSSQAYGAAGYGSSQAPQSNYGQQPASYPGYGQQQPASAPS
ATSYSSASQGASGYTQPQSGGVGANAGAAAGGGYGPPGGYAGQGQPPQHSAGGAGSQYSQ
QQPSYNAPPPQSYSQQQGQYGQGGGAGGYSQEPPQMGGGGGGGGYGGPESGGYGGQDSRG
RGRGGFGGGRGGFDRGGRGGPRGRGGMGGGDRGGFSKFGGPRDQNLGGPPMPMQEQDNSD
NNTIFVQGLGDGYTVDSVADYFKQIGIIKINKKTGLPMINLYTDRETGKLKGEATVSFDD
PPSAKAAIDWFDGKEFCGNPLKVSFATRRADFVRGGGNMRGGRGRGDMPFRSEGPMGRGG
FGGGRGGGGFPSNNGGGGGGQQRAGDWKCSNPDCGNLNFSWRNECNQCKAPKPEGAGGPP
PMGGGFGGDRGGRGGFDRGGFRGRGGDRGGFRGRGGDRGGFGQGKMDGRGEHRQDRRDRP
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacgattattcccagacagcagcacaaggctatggagcgtatggtgctcaa
gcagggcaaggctatacccagccaccagcccaggcctacagccagcagagctatgccagc
tatggacagtcctctgacaccagtgcagccagttacagccagggaggttacggggctgcc
tatggacagacccagacaggtggctatggagcgcagcctgcctctcagggttacagccag
tccagccaggcttatggagctgctgggtatgggagcagccaggccccccagagcaactac
gggcagcagccagcctcgtacccgggctacgggcaacaacaaccagcctcggccccatca
gctaccagctacagtagcgcctcccagggtgcctctggctacacacagcctcagagtgga
ggggtgggggccaatgctggagctgcagcaggagggggttatggacccccagggggctat
gctgggcagggccagccccctcagcattcagcaggaggcgcagggagccaatacagccaa
cagcaaccaagctacaatgctcccccaccccagagctacagccagcagcaggggcagtat
ggtcaaggaggaggagcaggagggtacagtcaggagcctccccagatgggagggggcgga
ggaggaggggggtacgggggtcccgagtctggcgggtacggagggcaggatagcagagga
aggggcaggggtggatttggaggaggaagaggaggctttgacaggggaggaagaggagga
cccagagggagaggcggcatgggcggtggggacagaggaggcttcagtaaattcggtgga
cctagagatcaaaatcttggtggaccacccatgcctatgcaagaacaagacaactctgac
aacaacaccatctttgtgcaggggttaggggatggctacacggtcgactctgtggcagat
tacttcaagcaaattggcataatcaagattaataagaagactggcttgcccatgattaac
ctctacacagaccgcgagacgggcaagctgaagggagaagccacagtgtcttttgacgac
ccgccctctgccaaggctgctatagactggtttgatggcaaggaattctgtgggaatcct
ctgaaggtctccttcgctactcgccgggctgactttgtgagagggggtgggaacatgaga
ggagggcgtggccgaggagacatgccctttcgctccgaagggcccatggggagaggaggg
tttgggggaggaagaggcggaggagggttccctagcaacaatggaggaggcggagggggt
cagcagagagctggagactggaaatgctcaaaccctgattgtgggaacctgaacttctcc
tggaggaatgagtgtaaccaatgcaaagcgcccaaaccagagggggctggcggcccccct
cccatgggaggtggttttggtggtgatcgtggtggcagaggtggttttgaccgtggcggg
tttagggggcgtggtggagaccgagggggtttccgcgggaggggcggtgaccggggaggc
tttggacaagggaaaatggatggcagaggtgaacacagacaggacagacgagacagacct
tactaa
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