Polyodon spathula (Mississippi paddlefish): 121305227
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Entry
121305227 CDS
T07273
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121305227 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121305227 (wdr41)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
121305227 (wdr41)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
UPF0128
Motif
Other DBs
NCBI-GeneID:
121305227
NCBI-ProteinID:
XP_041092708
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All DBs
Position
2:100009076..100025625
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AA seq
470 aa
AA seq
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MLFCVRSFVVALHSHKLGMLRWLLGDRESQGPVEKTTVLFIGEEQPKNAYTELQVLKGHF
DMVRFLVRIDDVRFASAGDDGIVLLWNVQTGERLHELRGHSQQITAITRFQKHSAESSCP
MILSASSDRSVSLWDADTGNRVQTVTDLRSSVKCLLVLERLDLWLSGGNDLCVWNRNFEL
LCKTEDFNDAGITAMIELPKNCIAAAMDKELIIYRLTVPSSELESWEIQEVKRLIDHQDS
IRALISVNDQAFASGSHVGELIVWDSLDWTIQSYERVFGDTAQADIQSEIKLLSPKQNEM
SVQHLTSDGEYIVAAIGSGIYVYSLLTKNVIAYRKTAHDSDVLHTLKLPNGQLISCSEDG
SVRFWMLQDLPPPAEHASSAFFGMWGFGRANKQPNQQVKKGADCLVLRSLELTGDLIGHS
GAVQMFLPFNDNVLVTCSTDHLVMLWKDGDRESRLRSLDLFNKLEQNKGL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttgtgttcgttcatttgttgttgcgttgcattctcacaaactagggatgttg
cgatggcttcttggagaccgagaatcacaggggcctgtagagaaaaccacagtgttgttc
attggagaagaacaaccgaagaacgcttacacggaactccaggtgctcaaagggcacttt
gacatggttcggtttctggtgcggattgatgatgtcaggtttgcttcagctggcgatgat
gggatcgtgttgctgtggaatgttcagacaggagagaggcttcatgagctgcggggtcac
agccagcagataactgccatcacccggtttcagaagcacagtgctgaatcgagctgcccc
atgatcctctctgcctcctcggacaggtctgtcagtctgtgggatgcagatactgggaat
cgtgtccaaactgtgacagacttgcgctcgtctgtgaagtgcctgctcgttctggaaagg
cttgatttgtggctgtctggagggaatgacctgtgtgtctggaataggaactttgagctt
ctttgtaaaacggaggactttaatgatgcaggaatcactgccatgatagagctgcctaag
aactgcattgcggcggcgatggacaaagaactaatcatatacagactgacggtgccatcc
tctgaattggaaagctgggagattcaggaggtcaagagacttatagaccaccaagacagc
atccgggctttgatcagtgtgaatgaccaggcctttgcaagcggttctcatgtgggtgag
ttgatagtctgggattccctggactggaccattcagtcatatgaacgtgttttcggggac
actgcacaggcggacattcagtcagaaatcaaactactatcacccaagcagaatgaaatg
tctgtacaacacctgacttccgatggggagtacattgttgctgcaattggaagtggtata
tacgtctacagcctgctgacaaagaatgtgatagcgtacaggaaaaccgcgcatgactcg
gatgtgttacacaccttgaagctacccaatgggcagctgatttcctgttcagaagatggg
agtgtccgtttctggatgctgcaggacctccctccccctgccgagcatgcatcctcagca
ttctttggcatgtgggggtttggaagagcaaataaacagcccaatcagcaagtgaagaag
ggggcggactgcttggtcctccgctctctggaactgaccggggacctcatcgggcactct
ggagctgtgcagatgtttctgccttttaatgacaatgtcctggtgacttgctctactgac
catctcgtcatgttgtggaaggatggagaccgggagtcaaggctgagaagcttggactta
tttaacaaacttgagcaaaataaaggattatga
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