Polyodon spathula (Mississippi paddlefish): 121305251
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Entry
121305251 CDS
T07273
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4-like
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04148
Efferocytosis
pspa04218
Cellular senescence
pspa04310
Wnt signaling pathway
pspa04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121305251
04020 Calcium signaling pathway
121305251
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121305251
09143 Cell growth and death
04218 Cellular senescence
121305251
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121305251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121305251
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121305251
BRITE hierarchy
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
121305251
NCBI-ProteinID:
XP_041092742
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Position
42:complement(697203..735159)
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AA seq
963 aa
AA seq
DB search
MGAAPGWEDGELEFKLVFEDDPLPGSGSTAADLERGRPADENNNRDADQEGSPTPSTERP
SPTAKQPILISQNRPGGGPLLPSTNNRAGMHSPPPRPTVDKDFFGTYESQPARYIQLDSS
RVLECPSIQITPISPQDSQEETYYCPWERTSRDHLYLPLDAFSYRDGGSLSPSSASSLSS
RSWVSDASSDSLLLGDEEELNEATCRFNLGTRSTSPRLGPLLSSPTSPSSRPASPGGKRR
HSGCLDSYSPLPSPSISRRGSFSEDPLSPDSSSEVPEFGFPTFSGLNVPLEPDNIPQKAR
KTSLEQSARKEDPSESSNNGYPVIDVEEGYVQGQESYHTALGIPSGMDYLSVPSPLAWSK
ARMSGHSPIFRSTAPPPLDWPLPSQFDHYELRVEVQPRSHHRAHYETEGSRGAVKASPGG
HPIVKLSGFSEKPLSLQMFIGTADERSLRPHAFYQVHRITGKMVSTASQELVLGGTKILE
IPLNPENGMRASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVQIPQGAGKVVSI
QTASVPIECSQRSAQELPSVESCNITSCSMVGGEELVLTGSNFLPESKVIFIEKGPDGKL
QWESEAQVDRDKSSECELCVEVPGYCNETASKPVQVYFYVSNGKRKRSSTQCFKYLPVMF
KEEPPPVLMSNLQCPRVTDPSNSRVSLPCQSLDPGGGQYPANPCYQRREKPSNQPDYPHG
FLSPAPRRFPFREELENVAANFLDHLDYEAEPGVNGLLLPHLQKPDSTPSLAWLDSPYQS
SSPSSLSPYAQNSPVSSSPQSMLCGPNLGYPSESFEGLPLQMGYAIDQVPPYALHRVNFW
SNDSFPGYHAGAQEQHLPPYPSYPYANSSAELASPSEKPSGDLSLPEQTPFDSESHQDPV
YQGKGRGDGSQYIVEREVKSGFEGYGPPFRNVPIQGITLEEVNEFIGESLTQFPETTLGG
RPN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgcgccaggatgggaggatggtgaactggagtttaaactggtttttgaagac
gatccattgcctggttcgggttcgactgccgccgatctggagagagggagacccgcagac
gagaacaataatcgggatgccgaccaggagggaagcccaaccccttccacagaacgtccc
tcccctactgccaaacagccaatcctgatctcccaaaatcgaccggggggtggtcctttg
cttccttccaccaataaccgtgccggaatgcattctcctccccccagaccaacagttgac
aaagatttcttcgggacatacgaaagccagccggctcggtacattcagctagacagctct
cgggttttagaatgtcccagcatccagatcacccccatatcgcctcaggatagccaggaa
gaaacctactattgtccttgggagagaacttctagggatcatttgtaccttcccctggat
gctttcagctaccgagatggaggttctttaagccccagctctgccagcagcctctcttct
agaagttgggtatcggatgcttcaagtgattctttactacttggtgatgaagaagaacta
aatgaagcaacttgtcgattcaacctgggaacgaggtcaacgtcccccagactgggccct
ctcctctcgtctcctacctcccccagttccagacctgcttctccaggaggcaagagaaga
cattcgggatgtctggactcgtattcccctctcccctcaccctccatttcaagaagaggc
agtttttcagaggaccccttatctccagattcctcatccgaagtcccggaatttggtttc
ccaactttctcaggattaaacgtccctctagagccagataacatcccacagaaagcccgg
aaaacttctttggaacagagcgccaggaaagaagatccgtctgagagtagcaataatggt
tatccggttattgatgtggaggagggatacgtgcaggggcaggagagctaccacactgct
cttggtataccctctggcatggattatctatcagtcccttctcctctcgcttggtctaaa
gctaggatgagtggacatagccccatttttcggtccaccgccccccctcctctggactgg
cccctcccctcgcagtttgaccactatgaactgagggtggaggtgcagccccggtcacac
caccgcgcccactatgagaccgagggcagccggggggcagtcaaggcatcgccagggggg
caccctatcgtcaagctatcagggttcagcgagaagccgctgtccctccagatgttcatc
ggcaccgctgacgagcgatccttgcgccctcacgccttctatcaggtccaccgcatcact
ggcaaaatggtgagcacagccagtcaggagctcgtactgggagggaccaagatcctggag
attccactgaaccctgagaacgggatgagagccagtattgactgtgccgggattctaaag
ctgcggaattctgacattgagcttcgaaagggagagacagacattgggcgtaagaacacc
agagtgaggctggtcttcagagtgcaaatcccacagggagcgggcaaagtggtgtccatc
cagactgcatcagtgcctatagagtgctctcagcgctcggcccaggagttgccctctgtg
gagagttgtaacatcacttcctgctccatggtggggggggaggagcttgtgctgaccggc
tccaacttcctgccagagtcaaaggtcatcttcattgagaaggggccagatggtaaactc
caatgggagagtgaggcccaggtagaccgggacaaaagcagtgagtgtgagctgtgtgtg
gaggtcccggggtactgcaatgagacggcaagcaagccagtccaggtttacttctacgtt
tccaatgggaaaagaaagcgcagttcaacacagtgcttcaaatacctgccagtgatgttc
aaagaagaacctccaccagtcctaatgagtaatctgcagtgccctcgagtgacagatccc
agtaattccagagtgtcactgccttgccagtcactcgacccaggaggtggacaataccca
gcaaacccttgctaccaaagaagagagaagccctcgaaccagcctgactatccccacggc
ttcctgagccctgctcccagacgtttcccattccgggaagaattagaaaacgtggcggcc
aattttctggatcatcttgactacgaggcggagccgggggtcaacgggcttctcctccct
cacttgcagaagcccgactcgaccccgagcctcgcgtggctggactccccctatcaatca
tcgtctccctcctccctgagcccctacgcacagaacagtcccgtctccagttcccctcag
tcgatgctgtgtggacccaatcttggttacccttcggagagctttgaaggcctccccttg
cagatggggtatgccatagatcaggtgccgccgtacgctctgcatcgggtgaatttctgg
agcaacgattcgtttcccgggtatcatgctggagctcaggagcaacaccttccaccatat
ccctcatacccctatgccaattcctctgcagagttagccagtccctcggaaaagccctcg
ggcgacctgtctctgcccgaacagacacccttcgactcagagtctcaccaggatcctgtg
taccagggtaagggtagaggcgatgggtcgcaatacattgtggagagagaggtgaagtct
ggattcgaaggatacggacctccctttaggaatgttcccattcaagggatcactctggaa
gaagtgaatgaatttattggagaaagtctgacacaatttcctgaaacaactcttggagga
agaccaaactaa
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