Polyodon spathula (Mississippi paddlefish): 121305393
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Entry
121305393 CDS
T07273
Symbol
bgnb
Name
(RefSeq) biglycan b
KO
K08118
biglycan
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121305393 (bgnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121305393 (bgnb)
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
121305393 (bgnb)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_14
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121305393
NCBI-ProteinID:
XP_041092939
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Position
43:complement(1592502..1613648)
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AA seq
369 aa
AA seq
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MMSPLLPLLSLLVSSLALPFEQRGFLDFSLDFGEGGVSMMMMNDEEGSAFEEETPPPPGP
GPVCPFGCHCHLRVLQCSDLGLTSVPKNIPSDTALLDLQNNKITELKENDFKGLHNLYAL
SLVNNRISKVSGKAFQPLRRLHKLYFSKNLLTEVPQGLPPSLVELRIHENRIKSVRKGAF
KGLGSMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDFPANINELHLDHN
QIQAIELEDLIRYKSLYRLGLGYNHIRMIENGSLAFVPNLRELHLDNNRLTKIPANLPDL
RYLQVIYLHANNISQVGVNDFCPQGFGVKRAFYNGISLFSNPVNYWEVQPAAFRCVTDRL
AIQFGNYKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcctctcctccctctcttgtccctgctcgtctcctctctcgcactccccttt
gagcagaggggttttctggacttttcgctggactttggcgaggggggggtctcaatgatg
atgatgaacgatgaggagggctcagccttcgaggaggagacccccccaccccccggccca
ggaccagtctgcccttttggctgtcactgccacctgagagtgttacagtgctctgacctg
ggtctgacctcagttcccaagaacatcccctcagacacagccctgttggacctgcagaac
aacaagatcaccgagctgaaagaaaacgactttaaggggctccacaacctctacgcgctg
agcctggtcaataaccgcatctccaaggtgagcggcaaggccttccagcctctgaggcgt
ctgcacaagctctacttctccaagaacctgctgactgaggtcccgcagggcctgcccccc
tcgcttgtggagctcagaatccacgagaacagaatcaagagcgtccgcaagggggccttc
aagggactgggcagcatgaactgcatcgaaatggggggtaaccccttagagaacagcgga
tttgaacccggggcctttgatggactgaaacttaactaccttcgaatctctgaagctaaa
cttactggaattcccaaagatttcccagccaatatcaatgagctgcacctcgatcacaat
cagattcaagccattgagcttgaggacctcatcagatacaagagtctctacaggctgggg
ctggggtacaatcacattcgcatgattgagaatggcagccttgccttcgtcccaaacctg
agggagcttcacctggacaacaaccgactgaccaagataccagccaacctgccggacctg
agatacctgcaggtgatttacctgcacgctaacaatatcagccaggtgggagtgaatgat
ttctgcccccaaggcttcggtgtgaagcgagctttctacaatggcatcagccttttcagc
aatccggtcaattactgggaggtccaaccagcagccttccgctgtgtcacagacagactg
gctatacagtttggcaactacaagaagtga
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integrated database retrieval system
