Polyodon spathula (Mississippi paddlefish): 121305466
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Entry
121305466 CDS
T07273
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121305466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121305466
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121305466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
BBS2_Mid
Beta-prop_Vps41
Beta-prop_EIPR1
KNTC1_N
WDR54
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_NWD2_C
Utp8_C
Motif
Other DBs
NCBI-GeneID:
121305466
NCBI-ProteinID:
XP_041093044
LinkDB
All DBs
Position
2:complement(101053969..101062849)
Genome browser
AA seq
525 aa
AA seq
DB search
MTTYKPLRVQSYPKLGEKVTQDTIYWKNYKTAVQIKEFGAVTKIDFSPLSPYNYAVTAST
RIHIYGQYSQEPIKTFSRFKVPAYCGTYRDDGKLLVSGSEDGVVRLFDIDGKGILRQLSG
HTKAVHVADFTSDKYRILSGSDDYTTRLWDIANSTQLLSYSEHTDYVRCGTTSKLNPDLF
VTGSYDHTIKVFDARTDSSVMTMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQE
LVSLRNHHKTVTSLCLSSSGHRLLSGSLDRHVKVYSTTNYKVVHSFDYAASILSLALAPE
DKVIVVGMTNGVLSVRHKKQAEDKLGAANIQRRRPAYRFFVKGKDYMPKQDDILVSKPVK
IHLKKYDRQLKSFEVSEALNTVLQPHIRVKSPEVTVAVMQELNRRGTLKSALAGRDEKNL
TMLLSFLIRHIVDPRFAPVLVNVADMILDIYILVVGQSAVIDKQFVKLQELIEKEIDYQE
ELVEVLGMMDTLFATMTAKKEAAAPERKPNRPVDGQEPSVTMETA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttacaaaccattaagagttcaaagctacccaaagcttggagagaaagtcacc
caagacaccatatactggaaaaactataagactgcagtccagataaaggaatttggtgca
gttacaaaaatcgacttctctccactctcaccatataattatgctgtaacagcatctacc
aggatccatatctatggccagtactctcaggaaccaatcaaaaccttctcccggttcaaa
gtcccagcctactgcggcacctacagggacgatggcaagctgcttgtgtctggcagtgaa
gacggggtggtgcggctctttgatattgatgggaagggaatactccgccagctgtcaggg
cataccaaggctgtacatgtagcagacttcacatcagacaaatacaggatattatcagga
tcagatgactacacaacgcgactttgggacatcgcgaattccacgcaattactgtcctac
agtgaacatacagattatgtacgctgtgggaccacgagcaaattgaacccagaccttttt
gttacaggttcatatgatcacacgataaaggtttttgatgcaagaacagacagcagcgtg
atgacaatggaccatggccagccagtggagagtgtcttgctgttcccttcaggggggctt
ctagtgtctgcaggtggccgctatgtgaaagtctgggacatgttgaaaggagggcaggag
ctagtatctttaagaaatcatcacaaaacagtgacgagtctatgtctgagtagctcagga
cacagattactttctggatcgcttgacaggcatgtcaaagtatacagcacaacaaactac
aaagtagttcatagctttgattatgcagcatccattctgagtcttgcactagcgcctgaa
gataaggtgattgttgtgggaatgacaaatggagtgctgagcgttcgacacaagaaacaa
gcagaagacaaactgggggccgcaaatatacagaggaggcggccagcctatcgcttcttt
gtgaaagggaaggactacatgccaaagcaggatgacattttggtcagcaaaccagtcaaa
atacacttgaaaaagtatgacaggcagctcaagagttttgaggtgtcagaggctctcaac
acagtcctacagccacacatccgagtgaagagcccagaggtgaccgttgcagtcatgcag
gagctgaaccgcagaggcactctgaagagtgcacttgcaggtcgagatgagaagaatctc
acaatgctgctcagcttcttaatcaggcacatagttgatccaaggtttgcacctgtttta
gtaaatgtggcagatatgattctggatatctacattctggttgtgggccagtcggcagtg
attgataaacagtttgtaaagctgcaggagctgatagagaaggagattgattaccaggag
gagctggtagaggttctggggatgatggacactctgttcgctaccatgactgccaagaaa
gaggcagcagcacccgagaggaaacccaacaggcctgtggacggacaagaaccgagcgtg
acgatggagacggcctga
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