Polyodon spathula (Mississippi paddlefish): 121305497
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Entry
121305497 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
pspa04980
Cobalamin transport and metabolism
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121305497
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
121305497
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121305497
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121305497
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121305497
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121305497
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121305497
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121305497
HMT complexes
COMPASS/SET1 complex
121305497
MLL-HCF complex
121305497
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121305497
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121305497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
121305497
NCBI-ProteinID:
XP_041093071
LinkDB
All DBs
Position
43:2958835..2986692
Genome browser
AA seq
1933 aa
AA seq
DB search
MTSGRRKSLSQTYWTRAKRPTAHVASDTQGPAPVQPRWKRVLGWSGPVPRPRHGHRAVAI
KELMVVFGGGNEGIVDELHVYNTATNQWFVPAVRGDIPPGCAAYGFVCDGTRLLVFGGMV
EYGKYSNDLYELQASRWEWKKLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSED
PKNNIPRYLNDLYVLELRAGSSVVGWDVPITYGVLPPPRESHTAVVYTEKDSRKSRLVIY
GGMSGCRLGDLWTLDIDTLTWSKPTLSGTAPLPRSLHSTTTIGNKMHVFGGWVPLVMDDV
KVATHEKEWKCTNSLACLNLDSMTWEPIQMDTLEDNVPRARAGHCSVSINSRLYVWSGRD
GYRKAWNNQVCCKDLWYLETEKPPAPSRVQLVRANTNSLEVSWGAVPTADSYLLQLQKYD
IPAATAASCPVLNPAPSLPVSQPRNPAPVAPAPPLGGGRGVLPHPSSLPVPGSPLGVAAT
ARGPAILKVAAPQSSGTSIVTVRHASQAGKSPVTVTSLPAGVRMVMPTQSGQPMGSSPQM
SGMAALAAAAAATQKIPPSATPTMLNVPAGATIVKTMALTSGSPALKVAAPIMVSNPATR
MLKTAAAQVGTSATSTGSTPTRPIITVHKSGTVTVAQQTQVVTTMVGGVTKSITLVKSPI
TMPGGTTLISNLGKMMSHTSQAASNSLAQLIQAKGQLPAGTILKLVTSADGKPATIITTS
QAGVTGNKPTILSIGSMSPTAASKPVTTTIIKTIPMSAIMTQPGVTGVTSGQGMKSPITI
ITTKMMTSGTGSPAKFITTMPKLSSGPGQQGLTQVVLKGAPGQPGTYLRTVPMGGVRLVT
PVTMSSVKPNVTTLVVKGTTGVTNLCTVTGTMSTSLAGGSVASANASLATPITTLGTIAT
LSSQVINPAALTVSTAQTSLTTAGSLSTPSITMQQPVNQATQVTLITTPSGVEAQPIQDL
PVSILASPTSEQPAIAGDQPGTVTLVCSNPPCETHETGTTNTATTASSNMGVQRVCSNPP
CETHETGTTNTGTTNTATTASSNMGVQRVCSNPPCETHETGTTNTATTASSNMGVQRVCS
NPPCETHETGTTNTATTASSNMGVQRVCSNPPCETHGTGTTNTATTASSNMGVQRVCSNP
PCETHETGTTSTATTASSNMGVQRVCSNPPCETHETGTTSTATTASSNMGVQRVCSNPPC
ETHGTGTTNTATTASSNMRVQRVCSNPPCETHETGTTSTATTASSNMGVQRVCSNPPCET
HETGTTSTATTASSNMGVQRVCSNPPCETHETGTTSTATTASSNMGVQRVCSNPPCETHE
TGTTSTTTTATSNMGDQGAQQSDEAAQEEAVTTAAAAEATPLPAPFTASTATPPPASTTM
QTRAVTLVTQSTPTPGPAVPSISSITEGGSASPDDSGQADCSQPSPCPDAQGPQPEDLPE
TELPGDSEPMQTEPAEPELMESGAEGELAQELQAGMDASEPALQCQEGAGDAGSLSAGEG
VDPLSLPQELMSDGQATGGATLMVTGLTPEELAAAEATAQAAATEEAQALAIQAVLQAAQ
QAVMRQGGQHTPVSTTIPIVLTQQELAALVQQQHQLQEAQAAAQQSLSQAALPTEGLAPA
DSLNDPASESNGHSELAGAVAGVLPAGAPAASESLAPSSSFCPPVASPATMQAATALAEE
ANGIESAAGKQAPPPAPPRPPVKKDNQWYDVGVIKTTNMVVTHFYLPSDDTPTGDVSDAG
TIPDYSQLKKLELQPGTAYKFRVAGVNACGRGSFSEISAFKTCLPGFPGAPCAIKISKSL
DGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGEPKASSPAQLAFMRVYCGPSPSCLVQTS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGTATKPAVKRPVSSSPEV
KPCGPKKSKSDGQ
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgggaggcggaagagcctctcgcagacgtactggacgcgcgcaaagcggccc
acggcccacgtggcgtcggacacgcaggggcccgctcctgtgcagccccggtggaagcgg
gtcctgggctggtccggtccggttccgcggccccggcacggtcaccgagccgtggccatc
aaggagctgatggtggtgtttggaggtggaaacgaggggatcgtggacgagctgcacgtc
tacaacacggccacaaaccagtggtttgtgccagcagtgcgaggagatatccctccgggg
tgcgctgcgtacggattcgtgtgtgacgggacgaggctgctggtgttcggaggcatggtg
gagtacgggaaatacagcaatgacctttacgagctgcaggccagcaggtgggaatggaaa
aagctgaaacccaaagcccctaaaaacggcccccctccctgcccccgcctggggcacagc
ttctccctggtggggaacaagtgctacctctttgggggtctggccaacgacagcgaggac
cccaaaaacaacattcccaggtatctcaacgacctgtacgttttggagctgcgcgcgggc
tccagcgtggtcggctgggacgtgcccatcacgtacggggtcctgccccccccgcgggag
agccacaccgccgtggtctacacggagaaggacagcaggaagtcccgcctcgtcatctac
gggggcatgagcggctgccggctcggggacctctggaccctcgacatcgacaccctgacg
tggagcaagcccaccctgagtggcacggccccccttccccgaagcttacactccaccacc
accatcggaaacaagatgcatgtgtttggtggctgggttcctcttgttatggatgatgtg
aaggtagcgactcacgagaaggagtggaaatgcaccaacagcctggcctgtctcaatctg
gactcgatgacgtgggagcccattcagatggacaccctggaggataacgtcccgcgcgcg
cgggcgggtcactgctctgtgtccatcaactcgcgcctctacgtgtggagcggccgggac
ggctaccgcaaggcctggaacaatcaggtgtgctgcaaggacctgtggtacctggagaca
gagaagccgcccgcgccctccagagtgcagctggtccgagccaacacgaactccctggag
gtgagctggggggcggtgcccacggcggacagctacctactgcagctgcagaaatacgac
atccctgcagccactgcggccagctgccctgtgctgaaccccgcgccctcgctgcccgtc
agccagcccaggaaccccgcccccgtggcccctgcccctcccttgggggggggcaggggg
gtactcccccacccctcctcgctgccggtgcctgggagcccgctgggggtcgccgccacc
gcccgtggaccagccatcctcaaggtggcagcgcctcagtccagtggcacctccattgtc
actgtgaggcacgcaagccaggccggcaagtctcctgtcactgtgacctcacttcctgcc
ggtgtgcggatggtcatgcccacgcagagtggccagccaatgggaagcagcccccagatg
agtgggatggccgcattggctgctgcagccgccgccacccagaagatcccgccctcggcc
acgcccaccatgctgaatgttccggccggagccacgatcgtcaagacgatggccctgacc
tccggctctcccgcgctcaaggtggccgccccaatcatggtcagtaaccccgccacgcgc
atgctgaagacggcagccgctcaggtgggcacctccgccacgtccacgggcagcactccc
acgcgacccatcatcaccgtgcacaagtctggcaccgttaccgtggcgcagcagacgcag
gtcgtcaccaccatggtgggaggagtcaccaaaagcatcacgctggtgaagagccccatc
accatgcctgggggcaccacgctgatctccaatttgggtaaaatgatgtcacacacgagc
caagcagcgtcaaactccctcgctcagctcatacaggctaaagggcagctgccagccggc
accattctaaagctggtcacctctgccgacggcaaaccggccaccattatcaccacgtcg
caggccggcgtcacgggcaacaagcccaccatcctgagcatcggcagcatgtccccgacc
gcggccagcaaacctgtcaccaccaccatcatcaagaccatccccatgtctgccatcatg
actcagcctggggtcaccggagtcaccagtggccagggcatgaagtcccccatcaccatc
atcaccaccaagatgatgacgtccggtaccggatccccagccaaattcatcaccaccatg
cccaaactgagcagcgggccgggccagcaggggctcacgcaggtggttttgaagggagcc
cctgggcaacccggcacgtacctgcgcaccgtcccgatgggaggggtgaggctggtcacc
cccgtcaccatgtcttcagtcaagcccaacgtcaccacactggtggttaaaggaaccaca
ggagtgacgaacctctgcactgtcactggtaccatgtccaccagcctggcggggggcagc
gtggccagcgccaacgcctccctggccacgcccatcaccacgctgggcaccatcgccacg
ctgtccagccaggtcatcaacccggcagccctcaccgtgtccacggcgcagaccagcctg
accacggccggcagcctgtccacgcccagcatcaccatgcagcagccggtgaaccaggcc
acccaggtgactctcatcacgacccccagcggcgtggaggcgcagcccatccaggacctc
cccgtctccatcctggcctctcccacctccgagcagcccgccatcgccggggaccagccc
ggcacagtcaccctggtgtgctccaacccgccctgcgagacccacgagaccggaaccacc
aacacagccaccactgcctcctcgaacatgggggtccagagagtgtgctccaacccgccc
tgcgagacccacgagaccggaaccaccaacacaggaaccaccaacacagccaccactgcc
tcctcgaacatgggggtccagagagtgtgctccaacccgccctgcgagacccacgagacc
ggaaccaccaacacagccaccactgcctcctcgaacatgggggtccagagagtgtgctcc
aacccgccctgcgagacccacgagaccggaaccaccaacacagccaccactgcctcctcg
aacatgggggtccagagagtgtgctccaacccgccctgcgagacccacgggaccggaacc
accaacacagccaccactgcctcctcgaacatgggggtccagagagtgtgctccaacccg
ccctgcgagacccacgagaccggaaccaccagcacagccaccactgcctcctcgaacatg
ggggtccagagagtgtgctccaacccgccctgcgagacccacgagaccggaaccaccagc
acagccaccactgcctcctcgaacatgggggtccagagagtgtgctccaacccgccctgc
gagacccacgggaccggaaccaccaacacagccaccactgcctcctcgaacatgagggtc
cagagagtgtgctccaacccgccctgcgagacccacgagaccggaaccaccagcacagcc
accactgcctcctcgaacatgggggtccagagagtgtgctccaacccgccctgcgagacc
cacgagaccggaaccaccagcacagccaccactgcctcctctaacatgggggtccagaga
gtgtgctccaacccgccctgcgagacccacgagaccggaaccaccagcacagccaccact
gcctcctctaacatgggggtccagagagtgtgctccaacccgccctgcgagacccacgag
accggaaccaccagcacaaccaccactgccacgtccaacatgggggaccaaggagcccag
cagtcagatgaagctgcccaggaggaggcagtaaccacggcggcggcagcagaagccacg
ccccttcctgcccctttcacagcatccacggcgacgccccctcctgccagcaccaccatg
cagacccgcgcagtcaccttggttacacagtccacgcccacacctgggccagctgtacca
tcgatttcctccatcaccgaaggagggtcagcctctcctgacgactcgggccaggcagac
tgcagccagccctccccttgccccgacgctcaaggaccacagccggaggacctgcccgaa
acagagctgccaggggactcagagcccatgcagacggagcccgcggagcccgagctcatg
gagagcggggcagaaggggagctggcgcaggagctgcaagctgggatggatgccagcgag
cccgctctgcagtgccaggaaggcgcaggagacgcggggtcgctgtccgcgggcgagggg
gtggatccgctgtctctcccccaggagctgatgtcggacggccaggccacgggaggggcc
acgctgatggtgacggggctcaccccagaggagctggccgccgcggaggcaacagcgcag
gcagcagccacagaagaggcccaggctctggcgatccaggcagtgctgcaggccgcacag
caggcagtgatgaggcagggcgggcagcacacccccgtctccaccaccattcccatcgtc
ctgacccaacaggagctggccgctctggtgcagcagcagcaccagctgcaggaggcgcag
gcagccgctcagcagagcttgtcccaggcagccctgcccacagagggtctggcaccagca
gacagcctgaacgacccggccagcgagagcaacgggcacagcgagctcgccggggctgtg
gcgggagtgctgccagcgggggcgccagcggccagcgagagtctggccccctccagctcc
ttctgtcctcctgtggccagcccagccacgatgcaggcagccactgcccttgcagaggag
gccaatgggattgagtctgcagccgggaagcaggctccgccccccgccccccccaggccc
cctgtgaagaaggacaaccagtggtacgacgtgggggtcatcaagaccaccaacatggtg
gtgactcacttctacctgccatcggatgacacgccgaccggagacgtgagtgacgctggc
accatcccggattacagccagctgaagaagctggagctgcagcccggcacggcctacaag
ttccgcgtggccggagtgaacgcctgtggtcgcggctccttcagcgagatctccgccttc
aagacctgcctgccggggttcccaggggccccctgcgccatcaagatcagcaagagcctg
gacggagctcacctgacctgggagcccccctccgtcacctctgggaagatcatagagtac
tctgtgtacctggcgatccagagcagccaggcaggggagcccaaggcctcgtccccggcc
cagctggccttcatgcgggtgtactgcgggcccagcccctcctgcctggtgcagacctcc
agcctgtccaacgcacacatcgactacaccaccaagccggccatcatcttccgcatcgcc
gcccgcaacgagaagggctacgggccggccacgcaggtgcggtggctgcaagagtccagt
aaagatggcacagctaccaaaccagctgtgaagagaccggtctcttcatcccctgaagtg
aaaccctgtggtccaaagaagtcaaaatctgacggccagtaa
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